G2246033


Basic Information

Item Value
gene id G2246033
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 5530900 ~ 5532619 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2568455
TAGAAAGGAATGCAGTTAAACCACATGATGTTTGCAGATCTGACACAGGTCaaactggggagagagagagagagagactgtaattcaaaatggaaccctattctctacagtatatagtgcactacttttgacccaagCATTATGGaacctggtcgaaagtagtgcactgtatagggaatagagtgtcatttgggataTAGACAGAGAGTATTGATGGGTCAGTTTCAGTACCGTAGTAGTAGTGTCTACAGGGAGGCAGGTATAGGAGTTTTGTAATATAATATTACAGTTTACTGGACTATGCTTTCATCAAACAAATCCCTTTGAATGTTGGCTTGATAGTTAGTAGATTTTTGAAAACAAAGATGGACTATACTCTTCCCTCTGAATGAGTACGTAGAGATAGAATGCGTACAGTCAGAGACATAgatttacattgacattttataGATGGTTCTGGGTACATTGTAGTTTCTCTACCATTCCATAACATTACTATGCAAAGAGTCAAGGAACATTGGCGTTAATTGTGGTATTGATAGCATCATAAATGGCCCAAAAaacatacactacactacaagtACATCCTTTTTAGTGAACAGGGAAACAACAAACGTACACTACAGTACAACCTTTTTAGTAAACAGGGAAACAACAAAcgtacactacagtacatcctTTTTAGTGAACAGGGAAACAACAAACGTACACTACAGTACAACCTTTTTAGTAAACAGGGAAACAACAAACGTACACTACAGTACAACCTTTTTAGTAAACAGGGAAACAACAAAcgtacactacagtacatcctTTTTAGTGAACAGGGAAACAACAAAACTTCTTATGCAGTCTTTATCTATCGCAGTGCAATAATGCATCTATCccctctatatactgtatatacagttacTGTATGTTGTTTTGTGTACAGCTTTGTTTCAAATGAATGTACAGATTGGCAGGTAGAAaggtagaagagagacagagacagacaaaagaGGAAGTTTGTGTAGGTTTACAGTATAAGTTAACCGATGGGACACAATGTTATCGTTTCTAATACTGATATGTCTACTGTCCGGGCACCGAAAACAAAACGAACAATGGCTGGGGACATCAAAATGACAACAAATACAGTATGTAGAAACACTACCTTCTGAGAGATCGATAGGAAACCAAGGTTTTGTTGTCACTAATGTTGTAGGGACAAACATCTGTGCGTACCACAACGATCAAGGTAGCCAATAGGaaagatgattttttttttttttttaaaagaaggcATTCCACAagagatggttgagagaatgttgcTGTTGGATGTTAGGTTGAGATGGGACGATAAGAGTAGGTTTGTTTAAGTGACCAAACTCTTGCTGAAGCAAGGCCCTGTATTCCGCGTACAATACTCTAAATGCACGTGCACATTTCAGTTTGCTTTAGATTTTTTGTATTTGATCAAGTTTCACTTGATTTTGCACTTCTTTGATTCATTCCACGTTCCCATTGGCACACACCGTATTGGACTGACTTTGATTGGCCTGAAACAGGTGTCATTCACACACGACACCACGCTGTTCTCCATAAATGTCATAGTAACAGTCTGAGACCGCCGCCACACGCTAAACACAACACATTGTAATAGCCTGTTTATGTTATACAGTTATAACAAAAATTTTTATCAGGAAATGTAAACGTTCCACTTCAACCCTCTGGA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2568455 True 1720 lncRNA 0.38 1 5530900 5532619

Neighbor

gene id symbol gene type direction distance location
LOC110504358 LOC106604155 coding downstream 4108 5488729 ~ 5526792 (-)
LOC118945992 NA coding downstream 742580 4787439 ~ 4788320 (-)
LOC110504469 LOC106612313 coding downstream 936595 4589433 ~ 4594305 (-)
LOC110513918 syub coding downstream 1240409 4236169 ~ 4290491 (-)
LOC110504518 LOC106612310 coding downstream 1330957 4130654 ~ 4199943 (-)
LOC110504491 LOC106604157 coding upstream 240 5532859 ~ 5604780 (-)
LOC110504359 LOC106612272 coding upstream 174799 5707418 ~ 5731006 (-)
LOC118946011 NA coding upstream 206675 5739294 ~ 5740052 (-)
LOC110504499 LOC106604166 coding upstream 583495 6116114 ~ 6422429 (-)
LOC110504506 LOC106612265 coding upstream 1595250 7127869 ~ 7201500 (-)
G2246038 NA non-coding downstream 27152 5503415 ~ 5503748 (-)
G2245962 NA non-coding downstream 48758 5481918 ~ 5482142 (-)
G2245831 NA non-coding downstream 163532 5366988 ~ 5367368 (-)
G2245797 NA non-coding downstream 191557 5339116 ~ 5339343 (-)
G2246053 NA non-coding upstream 7718 5540337 ~ 5540754 (-)
G2246054 NA non-coding upstream 8164 5540783 ~ 5541526 (-)
G2246056 NA non-coding upstream 18098 5550717 ~ 5551917 (-)
G2246058 NA non-coding upstream 21062 5553681 ~ 5553897 (-)
G2246061 NA non-coding upstream 26300 5558919 ~ 5559171 (-)
G2245152 ctnna1 other downstream 908910 4535841 ~ 4621990 (-)
G2244811 NA other downstream 1417899 4111702 ~ 4113001 (-)
higd2a LOC106612309 other downstream 1430228 4098767 ~ 4100716 (-)
G2243801 NA other downstream 2593358 2936604 ~ 2937542 (-)
G2243777 NA other downstream 2643441 2885291 ~ 2887459 (-)
G2246314 NA other upstream 315500 5848119 ~ 5852599 (-)
G2247416 NA other upstream 1337968 6870587 ~ 6871100 (-)
G2247565 NA other upstream 1406004 6938623 ~ 7024539 (-)
G2247813 NA other upstream 1722725 7255344 ~ 7255940 (-)
G2248522 NA other upstream 2508257 8040876 ~ 8041480 (-)

Expression


Co-expression Network