G2247290


Basic Information

Item Value
gene id G2247290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 6709849 ~ 6710694 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2570007
agatactactgcactgttggagctaggaacacaagcatttagttagatactactgcactgttggagctaggaacacaagcatttagttagatactactgcactgttggagctaggaacacaagcatttagttagatactactgcactgttggagctaggaacacaagcatttagttagatattactgcactgttggagctaggaacacaagcatttagttagatattactgcactgttggagctaggaacacaagcatttagttagatactactgcactgttggagctaggaacacaagcatttagttagatactactgcactgttggagctaggaacacaagcattttgttagatactactgcactgttggagctaggaacacaagcatttagttagatactactgcactgttggagctaggaacacaagcatttagttagatactactgcactgttggagctaggaacacaagcatttagttagatactactgcactgttggagctaggaacacaagcatttagttagatactactgcactgttggagctaggaacacaagcatttagttagatactact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2570007 True 582 lncRNA 0.40 2 6709849 6710694

Neighbor

gene id symbol gene type direction distance location
LOC110504499 LOC106604166 coding downstream 287420 6116114 ~ 6422429 (-)
LOC118946011 NA coding downstream 969797 5739294 ~ 5740052 (-)
LOC110504359 LOC106612272 coding downstream 978843 5707418 ~ 5731006 (-)
LOC110504491 LOC106604157 coding downstream 1105069 5532859 ~ 5604780 (-)
LOC110504358 LOC106604155 coding downstream 1183057 5488729 ~ 5526792 (-)
LOC110504506 LOC106612265 coding upstream 417175 7127869 ~ 7201500 (-)
LOC110504480 LOC106612296 coding upstream 987489 7698183 ~ 7725792 (-)
LOC110504483 LOC106612297 coding upstream 1124549 7835243 ~ 7849870 (-)
LOC110504356 LOC106612292 coding upstream 1147431 7858125 ~ 7871099 (-)
LOC110504484 smad5 coding upstream 1161200 7871894 ~ 7892178 (-)
G2247279 NA non-coding downstream 12095 6694521 ~ 6697754 (-)
G2247274 NA non-coding downstream 19769 6689704 ~ 6690080 (-)
G2247267 NA non-coding downstream 28228 6678712 ~ 6681621 (-)
G2247266 NA non-coding downstream 32597 6676915 ~ 6677252 (-)
G2247243 NA non-coding downstream 70432 6638719 ~ 6639417 (-)
G2247317 NA non-coding upstream 34521 6745215 ~ 6745925 (-)
G2247339 NA non-coding upstream 69814 6780508 ~ 6780955 (-)
G2247380 NA non-coding upstream 120556 6831250 ~ 6831710 (-)
G2247381 NA non-coding upstream 121244 6831938 ~ 6832199 (-)
G2247432 NA non-coding upstream 191132 6901826 ~ 6902095 (-)
G2246314 NA other downstream 857250 5848119 ~ 5852599 (-)
G2245152 ctnna1 other downstream 2087859 4535841 ~ 4621990 (-)
G2244811 NA other downstream 2596848 4111702 ~ 4113001 (-)
higd2a LOC106612309 other downstream 2609177 4098767 ~ 4100716 (-)
G2243801 NA other downstream 3772307 2936604 ~ 2937542 (-)
G2247416 NA other upstream 159893 6870587 ~ 6871100 (-)
G2247565 NA other upstream 227929 6938623 ~ 7024539 (-)
G2247813 NA other upstream 544650 7255344 ~ 7255940 (-)
G2248522 NA other upstream 1330182 8040876 ~ 8041480 (-)
G2248668 LOC106612284 other upstream 1443217 8153911 ~ 8157963 (-)

Expression


Co-expression Network