Gene
RNA
| Item | Value |
|---|---|
| gene id | G2247339 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 6780508 ~ 6780955 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: pre-mRNA 3' end processing protein WDR33-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2570057 | True | 230 | lncRNA | 0.56 | 2 | 6780508 | 6780955 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504499 | LOC106604166 | coding | downstream | 358079 | 6116114 ~ 6422429 (-) |
| LOC118946011 | NA | coding | downstream | 1040456 | 5739294 ~ 5740052 (-) |
| LOC110504359 | LOC106612272 | coding | downstream | 1049502 | 5707418 ~ 5731006 (-) |
| LOC110504491 | LOC106604157 | coding | downstream | 1175728 | 5532859 ~ 5604780 (-) |
| LOC110504358 | LOC106604155 | coding | downstream | 1253716 | 5488729 ~ 5526792 (-) |
| LOC110504506 | LOC106612265 | coding | upstream | 346914 | 7127869 ~ 7201500 (-) |
| LOC110504480 | LOC106612296 | coding | upstream | 917228 | 7698183 ~ 7725792 (-) |
| LOC110504483 | LOC106612297 | coding | upstream | 1054288 | 7835243 ~ 7849870 (-) |
| LOC110504356 | LOC106612292 | coding | upstream | 1077170 | 7858125 ~ 7871099 (-) |
| LOC110504484 | smad5 | coding | upstream | 1090939 | 7871894 ~ 7892178 (-) |
| G2247317 | NA | non-coding | downstream | 34583 | 6745215 ~ 6745925 (-) |
| G2247290 | NA | non-coding | downstream | 69814 | 6709849 ~ 6710694 (-) |
| G2247279 | NA | non-coding | downstream | 82754 | 6694521 ~ 6697754 (-) |
| G2247274 | NA | non-coding | downstream | 90428 | 6689704 ~ 6690080 (-) |
| G2247267 | NA | non-coding | downstream | 98887 | 6678712 ~ 6681621 (-) |
| G2247380 | NA | non-coding | upstream | 50295 | 6831250 ~ 6831710 (-) |
| G2247381 | NA | non-coding | upstream | 50983 | 6831938 ~ 6832199 (-) |
| G2247432 | NA | non-coding | upstream | 120871 | 6901826 ~ 6902095 (-) |
| G2247434 | NA | non-coding | upstream | 123896 | 6904851 ~ 6905120 (-) |
| G2247444 | NA | non-coding | upstream | 129008 | 6909963 ~ 6910165 (-) |
| G2246314 | NA | other | downstream | 927909 | 5848119 ~ 5852599 (-) |
| G2245152 | ctnna1 | other | downstream | 2158518 | 4535841 ~ 4621990 (-) |
| G2244811 | NA | other | downstream | 2667507 | 4111702 ~ 4113001 (-) |
| higd2a | LOC106612309 | other | downstream | 2679836 | 4098767 ~ 4100716 (-) |
| G2243801 | NA | other | downstream | 3842966 | 2936604 ~ 2937542 (-) |
| G2247416 | NA | other | upstream | 89632 | 6870587 ~ 6871100 (-) |
| G2247565 | NA | other | upstream | 157668 | 6938623 ~ 7024539 (-) |
| G2247813 | NA | other | upstream | 474389 | 7255344 ~ 7255940 (-) |
| G2248522 | NA | other | upstream | 1259921 | 8040876 ~ 8041480 (-) |
| G2248668 | LOC106612284 | other | upstream | 1372956 | 8153911 ~ 8157963 (-) |
