Gene
RNA
| Item | Value |
|---|---|
| gene id | G2247775 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 7105093 ~ 7105322 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: pre-mRNA 3' end processing protein WDR33-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2570550 | True | 230 | lncRNA | 0.49 | 1 | 7105093 | 7105322 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504499 | LOC106604166 | coding | downstream | 682664 | 6116114 ~ 6422429 (-) |
| LOC118946011 | NA | coding | downstream | 1365041 | 5739294 ~ 5740052 (-) |
| LOC110504359 | LOC106612272 | coding | downstream | 1374087 | 5707418 ~ 5731006 (-) |
| LOC110504491 | LOC106604157 | coding | downstream | 1500313 | 5532859 ~ 5604780 (-) |
| LOC110504358 | LOC106604155 | coding | downstream | 1578301 | 5488729 ~ 5526792 (-) |
| LOC110504506 | LOC106612265 | coding | upstream | 22547 | 7127869 ~ 7201500 (-) |
| LOC110504480 | LOC106612296 | coding | upstream | 592861 | 7698183 ~ 7725792 (-) |
| LOC110504483 | LOC106612297 | coding | upstream | 729921 | 7835243 ~ 7849870 (-) |
| LOC110504356 | LOC106612292 | coding | upstream | 752803 | 7858125 ~ 7871099 (-) |
| LOC110504484 | smad5 | coding | upstream | 766572 | 7871894 ~ 7892178 (-) |
| G2247657 | NA | non-coding | downstream | 15128 | 7089060 ~ 7089965 (-) |
| G2247650 | NA | non-coding | downstream | 20880 | 7083889 ~ 7084213 (-) |
| G2247460 | NA | non-coding | downstream | 180302 | 6924165 ~ 6924791 (-) |
| G2247444 | NA | non-coding | downstream | 194928 | 6909963 ~ 6910165 (-) |
| G2247434 | NA | non-coding | downstream | 199973 | 6904851 ~ 6905120 (-) |
| G2247793 | NA | non-coding | upstream | 35205 | 7140527 ~ 7141352 (-) |
| G2247799 | NA | non-coding | upstream | 104194 | 7209516 ~ 7215849 (-) |
| G2247801 | NA | non-coding | upstream | 118904 | 7224226 ~ 7224947 (-) |
| G2247806 | NA | non-coding | upstream | 132402 | 7237724 ~ 7238081 (-) |
| G2247816 | NA | non-coding | upstream | 153366 | 7258688 ~ 7258920 (-) |
| G2247565 | NA | other | downstream | 80554 | 6938623 ~ 7024539 (-) |
| G2247416 | NA | other | downstream | 233993 | 6870587 ~ 6871100 (-) |
| G2246314 | NA | other | downstream | 1252494 | 5848119 ~ 5852599 (-) |
| G2245152 | ctnna1 | other | downstream | 2483103 | 4535841 ~ 4621990 (-) |
| G2244811 | NA | other | downstream | 2992092 | 4111702 ~ 4113001 (-) |
| G2247813 | NA | other | upstream | 150022 | 7255344 ~ 7255940 (-) |
| G2248522 | NA | other | upstream | 935554 | 8040876 ~ 8041480 (-) |
| G2248668 | LOC106612284 | other | upstream | 1048589 | 8153911 ~ 8157963 (-) |
| c1qtnf2 | c1qtnf2 | other | upstream | 2041469 | 9145591 ~ 9148916 (-) |
| G2249506 | NA | other | upstream | 2044566 | 9149888 ~ 9150141 (-) |
