G2247799


Basic Information

Item Value
gene id G2247799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 7209516 ~ 7215849 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2570589
gttggtttcaccagtacaggttggttttattggtacaggttggttttattggtacaggttggttttattggtacaggttggttttattgggacatgttggttttattgggacaggttggttttaccagtacaggttggttttaccagtacaggttggttttattggtacaggttggttttattgggacaggttggttttattagtacaggttggttttattgggacaggttggttttattggtacaggttggttttattggtacaggttggttttaccagtacaggttggttttattgggacaggttggttttaccagtacaggttggttttattgggacaggttggttttaccagtacaggttggttttattggtacaggttggttttattggtacaggttggttttattgggacatgttggttttattgggacaggttggttttaccagtacaggttggttttattggtacaggttggttttaccagtacaggttggttatGTTAGTATATTTTTCTGCCATCAGTGTATCTGTCTGACTGTAATACGTTTAATT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106536118

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2570589 True 557 lncRNA 0.39 3 7209516 7215849

Neighbor

gene id symbol gene type direction distance location
LOC110504506 LOC106612265 coding downstream 8016 7127869 ~ 7201500 (-)
LOC110504499 LOC106604166 coding downstream 787087 6116114 ~ 6422429 (-)
LOC118946011 NA coding downstream 1469464 5739294 ~ 5740052 (-)
LOC110504359 LOC106612272 coding downstream 1478510 5707418 ~ 5731006 (-)
LOC110504491 LOC106604157 coding downstream 1604736 5532859 ~ 5604780 (-)
LOC110504480 LOC106612296 coding upstream 482334 7698183 ~ 7725792 (-)
LOC110504483 LOC106612297 coding upstream 619394 7835243 ~ 7849870 (-)
LOC110504356 LOC106612292 coding upstream 642276 7858125 ~ 7871099 (-)
LOC110504484 smad5 coding upstream 656045 7871894 ~ 7892178 (-)
LOC110504485 tgfbi coding upstream 680862 7896711 ~ 7926759 (-)
G2247793 NA non-coding downstream 68164 7140527 ~ 7141352 (-)
G2247775 NA non-coding downstream 104194 7105093 ~ 7105322 (-)
G2247657 NA non-coding downstream 119551 7089060 ~ 7089965 (-)
G2247650 NA non-coding downstream 125303 7083889 ~ 7084213 (-)
G2247460 NA non-coding downstream 284725 6924165 ~ 6924791 (-)
G2247801 NA non-coding upstream 8377 7224226 ~ 7224947 (-)
G2247806 NA non-coding upstream 21875 7237724 ~ 7238081 (-)
G2247816 NA non-coding upstream 42839 7258688 ~ 7258920 (-)
G2247821 NA non-coding upstream 49364 7265213 ~ 7265524 (-)
G2247986 NA non-coding upstream 80159 7296008 ~ 7296299 (-)
G2247565 NA other downstream 184977 6938623 ~ 7024539 (-)
G2247416 NA other downstream 338416 6870587 ~ 6871100 (-)
G2246314 NA other downstream 1356917 5848119 ~ 5852599 (-)
G2245152 ctnna1 other downstream 2587526 4535841 ~ 4621990 (-)
G2244811 NA other downstream 3096515 4111702 ~ 4113001 (-)
G2247813 NA other upstream 39495 7255344 ~ 7255940 (-)
G2248522 NA other upstream 825027 8040876 ~ 8041480 (-)
G2248668 LOC106612284 other upstream 938062 8153911 ~ 8157963 (-)
c1qtnf2 c1qtnf2 other upstream 1930942 9145591 ~ 9148916 (-)
G2249506 NA other upstream 1934039 9149888 ~ 9150141 (-)

Expression


Co-expression Network