Gene
RNA
| Item | Value |
|---|---|
| gene id | G2247801 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 7224226 ~ 7224947 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ORF2 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2570591 | True | 722 | lncRNA | 0.39 | 1 | 7224226 | 7224947 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504506 | LOC106612265 | coding | downstream | 22726 | 7127869 ~ 7201500 (-) |
| LOC110504499 | LOC106604166 | coding | downstream | 801797 | 6116114 ~ 6422429 (-) |
| LOC118946011 | NA | coding | downstream | 1484174 | 5739294 ~ 5740052 (-) |
| LOC110504359 | LOC106612272 | coding | downstream | 1493220 | 5707418 ~ 5731006 (-) |
| LOC110504491 | LOC106604157 | coding | downstream | 1619446 | 5532859 ~ 5604780 (-) |
| LOC110504480 | LOC106612296 | coding | upstream | 473236 | 7698183 ~ 7725792 (-) |
| LOC110504483 | LOC106612297 | coding | upstream | 610296 | 7835243 ~ 7849870 (-) |
| LOC110504356 | LOC106612292 | coding | upstream | 633178 | 7858125 ~ 7871099 (-) |
| LOC110504484 | smad5 | coding | upstream | 646947 | 7871894 ~ 7892178 (-) |
| LOC110504485 | tgfbi | coding | upstream | 671764 | 7896711 ~ 7926759 (-) |
| G2247799 | NA | non-coding | downstream | 8377 | 7209516 ~ 7215849 (-) |
| G2247793 | NA | non-coding | downstream | 82874 | 7140527 ~ 7141352 (-) |
| G2247775 | NA | non-coding | downstream | 118904 | 7105093 ~ 7105322 (-) |
| G2247657 | NA | non-coding | downstream | 134261 | 7089060 ~ 7089965 (-) |
| G2247650 | NA | non-coding | downstream | 140013 | 7083889 ~ 7084213 (-) |
| G2247806 | NA | non-coding | upstream | 12777 | 7237724 ~ 7238081 (-) |
| G2247816 | NA | non-coding | upstream | 33741 | 7258688 ~ 7258920 (-) |
| G2247821 | NA | non-coding | upstream | 40266 | 7265213 ~ 7265524 (-) |
| G2247986 | NA | non-coding | upstream | 71061 | 7296008 ~ 7296299 (-) |
| G2247989 | NA | non-coding | upstream | 90104 | 7315051 ~ 7315250 (-) |
| G2247565 | NA | other | downstream | 199687 | 6938623 ~ 7024539 (-) |
| G2247416 | NA | other | downstream | 353126 | 6870587 ~ 6871100 (-) |
| G2246314 | NA | other | downstream | 1371627 | 5848119 ~ 5852599 (-) |
| G2245152 | ctnna1 | other | downstream | 2602236 | 4535841 ~ 4621990 (-) |
| G2244811 | NA | other | downstream | 3111225 | 4111702 ~ 4113001 (-) |
| G2247813 | NA | other | upstream | 30397 | 7255344 ~ 7255940 (-) |
| G2248522 | NA | other | upstream | 815929 | 8040876 ~ 8041480 (-) |
| G2248668 | LOC106612284 | other | upstream | 928964 | 8153911 ~ 8157963 (-) |
| c1qtnf2 | c1qtnf2 | other | upstream | 1921844 | 9145591 ~ 9148916 (-) |
| G2249506 | NA | other | upstream | 1924941 | 9149888 ~ 9150141 (-) |
