G2248354



Basic Information


Item Value
gene id G2248354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 7785638 ~ 7786454 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2571258
TACTACAACACAGTCCTTTTATTATCAGGAGACACAATGTAACGTTCCTAAAACCATACAGTATTTATTGGATGGATGACCTATTGACCTATTGCATTGTAGAAGCGCCATACAAAACACATCAAGCCCTCAATAGGTTGATAGACACATAGCCAAGCAGTTTCCTATCTCTCACTTTCAATGTAAATACCACTAACACTACAGGGGTTCtgggaaaaaaaatgaaaaaaaaaatattttgacatGAAAAAGACTGACACAGAGGTGACAGCACAGAGCTCCAATGTTCCAATACTTTAAAAATGCATCATTAGTTATGGATAGGTGTAAGCATAGCAAGGTTATCATCACTTGAACCAATTTAGATCTGTGATTACTTGAAGAAAGCTAGGAAAGAAGAAAGGAACAGAGACTCTGTGGGGAGGCTGTTGAGGTCATAGGTCACTTTGGCAGAGGAGTGGCAGCGGTGAGGGACAAACAGAGCAGACGGACTATCCCCACTGGGTTCAATGTGGATGTATACACAGCACAGTTGACCGGTAGATTGACAGCTTCAGTTGGTGTTCTAGAGTGTTCCAGAAGCTCCACTGGTGTTCTGGAGCCTTCTGGAAGCCTGCTGGGTGGTTCTGGTTCTAGAGTGTTCTAGAGCCTTCAGGAAGCCTGCTGGGTGGTTCTGGTTCTAGTCTTGTCCTCCACACAGCATCAGCAGGGTCTTACGGTAGTCCCCTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2571258 True 729 lncRNA 0.44 2 7785638 7786454

Neighbor


gene id symbol gene type direction distance location
LOC110504480 LOC106612296 coding downstream 59846 7698183 ~ 7725792 (-)
LOC110504506 LOC106612265 coding downstream 584138 7127869 ~ 7201500 (-)
LOC110504499 LOC106604166 coding downstream 1363209 6116114 ~ 6422429 (-)
LOC118946011 NA coding downstream 2045586 5739294 ~ 5740052 (-)
LOC110504359 LOC106612272 coding downstream 2054632 5707418 ~ 5731006 (-)
LOC110504483 LOC106612297 coding upstream 48789 7835243 ~ 7849870 (-)
LOC110504356 LOC106612292 coding upstream 71671 7858125 ~ 7871099 (-)
LOC110504484 smad5 coding upstream 85440 7871894 ~ 7892178 (-)
LOC110504485 tgfbi coding upstream 110257 7896711 ~ 7926759 (-)
LOC110504508 LOC106612286 coding upstream 304580 8091034 ~ 8104745 (-)
G2248388 NA non-coding downstream 50027 7735126 ~ 7735611 (-)
G2248143 NA non-coding downstream 183326 7601756 ~ 7602312 (-)
G2248135 NA non-coding downstream 192513 7592466 ~ 7593125 (-)
G2248121 NA non-coding downstream 222082 7561491 ~ 7563556 (-)
G2248073 NA non-coding downstream 330397 7454337 ~ 7455241 (-)
G2248407 NA non-coding upstream 7888 7794342 ~ 7794593 (-)
G2248418 NA non-coding upstream 49794 7836248 ~ 7837026 (-)
G2248436 NA non-coding upstream 64289 7850743 ~ 7851049 (-)
G2248432 NA non-coding upstream 64911 7851365 ~ 7851589 (-)
G2247813 NA other downstream 529698 7255344 ~ 7255940 (-)
G2247565 NA other downstream 761099 6938623 ~ 7024539 (-)
G2247416 NA other downstream 914538 6870587 ~ 6871100 (-)
G2246314 NA other downstream 1933039 5848119 ~ 5852599 (-)
G2245152 ctnna1 other downstream 3163648 4535841 ~ 4621990 (-)
G2248522 NA other upstream 254422 8040876 ~ 8041480 (-)
G2248668 LOC106612284 other upstream 367457 8153911 ~ 8157963 (-)
c1qtnf2 c1qtnf2 other upstream 1360337 9145591 ~ 9148916 (-)
G2249506 NA other upstream 1363434 9149888 ~ 9150141 (-)
G2250247 NA other upstream 2165863 9952317 ~ 9952703 (-)

Expression



Co-expression Network