G2248418


Basic Information

Item Value
gene id G2248418
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 7836248 ~ 7837026 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2571324
TCTTCTAGAACTTTTAACCCAATAACCCCCTCTTCTAGAACTGTTCTAACACTATAACCCTGCCTTCTAGAACTGTTCTAATCCTGTTTTCTAGAACTGTTCTAACCCTGTCTTCTAGAACTGTTAACCCAATAACCCCCTCTTCTAGAACTGTTCTAACACTATAACCGTCTTCTAGAACTGTTCTAACCCTGCCTTCTAGAACTGTTCTAACCCTGTTTTCTAGAACTGTTCTAACACTATAACCCTGTCTTCTAGAACTGTTAACCCAATAACCCCCTCTTCTATAACTGTTCTAACACTATAACCCTGCCTTCTAGAACTGCTTTAACCCTATAACCACCTCTTCTAGAACTGTTCTAACCCTATAACCACCTCTTCTAGAACTGTTCTAACCCTATAACCCCTCTTCTAGAACTGTTCTAACCCTATAACCCCCTCTTCTAGAACTgttctaaccctataaccctgtCTTCTAGAATTGTTAACCCAATAACCCTGTCTTCTAGAACTgttctaaccctataaccctgtTTTCTAGAACTGTTCTAACACTATAACCCTGTCTTCTAGAACTGTTCTAACCCTATAACCCCGTCTTCTAGAACTgttctaaccctataaccctgcCTTGTAGAATTGTTCTAACCCTATCTTCTAGAACTGTTCTAACCCTATAACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2571324 True 683 lncRNA 0.40 2 7836248 7837026

Neighbor

gene id symbol gene type direction distance location
LOC110504480 LOC106612296 coding downstream 110456 7698183 ~ 7725792 (-)
LOC110504506 LOC106612265 coding downstream 634748 7127869 ~ 7201500 (-)
LOC110504499 LOC106604166 coding downstream 1413819 6116114 ~ 6422429 (-)
LOC118946011 NA coding downstream 2096196 5739294 ~ 5740052 (-)
LOC110504359 LOC106612272 coding downstream 2105242 5707418 ~ 5731006 (-)
LOC110504356 LOC106612292 coding upstream 21099 7858125 ~ 7871099 (-)
LOC110504484 smad5 coding upstream 34868 7871894 ~ 7892178 (-)
LOC110504485 tgfbi coding upstream 59685 7896711 ~ 7926759 (-)
LOC110504508 LOC106612286 coding upstream 254008 8091034 ~ 8104745 (-)
LOC110504516 LOC106612282 coding upstream 336195 8173221 ~ 8224552 (-)
G2248407 NA non-coding downstream 41655 7794342 ~ 7794593 (-)
G2248354 NA non-coding downstream 49794 7785638 ~ 7786454 (-)
G2248388 NA non-coding downstream 100637 7735126 ~ 7735611 (-)
G2248143 NA non-coding downstream 233936 7601756 ~ 7602312 (-)
G2248135 NA non-coding downstream 243123 7592466 ~ 7593125 (-)
G2248436 NA non-coding upstream 13717 7850743 ~ 7851049 (-)
G2248432 NA non-coding upstream 14339 7851365 ~ 7851589 (-)
G2248439 NA non-coding upstream 26589 7863615 ~ 7864572 (-)
G2248456 NA non-coding upstream 91500 7928526 ~ 7929157 (-)
G2248500 LOC106594768 non-coding upstream 176334 8013360 ~ 8016525 (-)
G2247813 NA other downstream 580308 7255344 ~ 7255940 (-)
G2247565 NA other downstream 811709 6938623 ~ 7024539 (-)
G2247416 NA other downstream 965148 6870587 ~ 6871100 (-)
G2246314 NA other downstream 1983649 5848119 ~ 5852599 (-)
G2245152 ctnna1 other downstream 3214258 4535841 ~ 4621990 (-)
G2248522 NA other upstream 203850 8040876 ~ 8041480 (-)
G2248668 LOC106612284 other upstream 316885 8153911 ~ 8157963 (-)
c1qtnf2 c1qtnf2 other upstream 1309765 9145591 ~ 9148916 (-)
G2249506 NA other upstream 1312862 9149888 ~ 9150141 (-)
G2250247 NA other upstream 2115291 9952317 ~ 9952703 (-)

Expression


Co-expression Network