Gene
RNA
| Item | Value |
|---|---|
| gene id | G2248708 |
| gene name | LOC106612280 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 8149547 ~ 8149918 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2571694 | True | 372 | lncRNA | 0.61 | 1 | 8149547 | 8149918 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504508 | LOC106612286 | coding | downstream | 44802 | 8091034 ~ 8104745 (-) |
| LOC110504485 | tgfbi | coding | downstream | 222788 | 7896711 ~ 7926759 (-) |
| LOC110504484 | smad5 | coding | downstream | 257369 | 7871894 ~ 7892178 (-) |
| LOC110504356 | LOC106612292 | coding | downstream | 278448 | 7858125 ~ 7871099 (-) |
| LOC110504483 | LOC106612297 | coding | downstream | 299677 | 7835243 ~ 7849870 (-) |
| LOC110504516 | LOC106612282 | coding | upstream | 23303 | 8173221 ~ 8224552 (-) |
| LOC110504517 | LOC106604175 | coding | upstream | 99614 | 8249532 ~ 8264238 (-) |
| LOC110504538 | g3bp1 | coding | upstream | 467046 | 8616964 ~ 8627201 (-) |
| sparc | sparc | coding | upstream | 487670 | 8637588 ~ 8656945 (-) |
| LOC110504555 | atox1 | coding | upstream | 528833 | 8678751 ~ 8681239 (-) |
| G2248521 | NA | non-coding | downstream | 109898 | 8039444 ~ 8039649 (-) |
| G2248519 | NA | non-coding | downstream | 110263 | 8039044 ~ 8039284 (-) |
| G2248514 | NA | non-coding | downstream | 113328 | 8036008 ~ 8036219 (-) |
| G2248510 | NA | non-coding | downstream | 124636 | 8022320 ~ 8024911 (-) |
| G2248500 | LOC106594768 | non-coding | downstream | 133022 | 8013360 ~ 8016525 (-) |
| G2248707 | NA | non-coding | upstream | 393 | 8150311 ~ 8151684 (-) |
| G2248710 | NA | non-coding | upstream | 3459 | 8153377 ~ 8153688 (-) |
| G2248668 | LOC106612284 | non-coding | upstream | 6700 | 8153911 ~ 8157963 (-) |
| G2248711 | NA | non-coding | upstream | 8966 | 8158884 ~ 8159274 (-) |
| G2248712 | NA | non-coding | upstream | 9555 | 8159473 ~ 8160386 (-) |
| G2248522 | NA | other | downstream | 108067 | 8040876 ~ 8041480 (-) |
| G2247813 | NA | other | downstream | 893607 | 7255344 ~ 7255940 (-) |
| G2247565 | NA | other | downstream | 1125008 | 6938623 ~ 7024539 (-) |
| G2247416 | NA | other | downstream | 1278447 | 6870587 ~ 6871100 (-) |
| G2246314 | NA | other | downstream | 2296948 | 5848119 ~ 5852599 (-) |
| c1qtnf2 | c1qtnf2 | other | upstream | 996873 | 9145591 ~ 9148916 (-) |
| G2249506 | NA | other | upstream | 999970 | 9149888 ~ 9150141 (-) |
| G2250247 | NA | other | upstream | 1802399 | 9952317 ~ 9952703 (-) |
| G2250775 | NA | other | upstream | 2375873 | 10525791 ~ 10526568 (-) |
