G2248707


Basic Information

Item Value
gene id G2248707
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 8150311 ~ 8151684 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2571693
CAAatcccaaacacacacaatatcaaGATTCACACAAACTCAGTCCAGTTATTTCCTTGTTCGTCAGCTGCTTGCCTAATAAATAAAAATGGAATTGAGAAAATGGTGACAGGTTTAAGACTTAGTCAACGATCTGGAAAACATGAAAGAAGGCGTCATTGAAATGACTTAAAATAGAGACAATGCTCTCAATGTTGTTTCTATATTTTTAAGAAAAAATGTACAATGTCATAACGTGAGAGTGACTGTCCTATGAGccttcaaatgtatttatttcttaGATTAAGTTGCTGTATCAGTTAAGTTTGCATACCGTTTAATCCAGTTGTTTTAGGTTGTACTAGATATCTGAAAGCATGACCTACTAACATAATACAGGTGGGATAATACACACAGGATGAAATCAGGTTACAGCCGTAATGAAACAATGGGAGTATCCCAGCAAATATGAACAAAGCACCTTATACAGCTTGGGAATGTAGGTGGAAGTCATTTACAAATGTTGTGCCATTGCTAGGATAGTCAAGAGGCAAGTGTGTCTAATACGAGGTAGACTGAGTACACAAGCACCTAATTCCTCACGGACGGTAGGCTATTTTTGATTGAAACATGTGCACGGCTTTCATTTGCATCCCTACGCTGTAGTTGCATCGATTACACATTAAAGATAGTTCACAAACTGAAACAGTTTGAAGTAGCAAAAGTACCTTCGTAATGTGCAATGTCTGTATCCTATTTGCTAATGATGACCCAGATGGTAAACATACTTCTGTATTGATGTTTAGGTGGTGGTTCTACTGCACAAAGTAAGCAGTGACTGTACTGAAAGTCTTACGGTAGTCGGATAGAGTCTTCTTTAGATTCAGGAAAAGTAAGGGAGAAGCAGAACTTGCATCAAATAAGCTTGTGCTATACTGTAGATTAGAAGTATCATTCAATTCCTGTACACTATAACAGGGTGTGCAGAAGAAGAGAAAGAACTGATCAAAAAAGGTTGGATTCTAAAACAGTGCATTTCATCAGATGGTGACACAAAGACACATCCGATTGAGATCGTTTGCGCATCAAATAAAATAACCTAACACTTTTTTATAATGAAGTGTCTCTTAACTGCAGATAACTGAGATTCTGTGCAAATTGTGCAGCTTTCCTCAGCACGCCTGCCTTCCTGGTTGCCCAGGGACCTCTGGAGCCGACCTTCAACACTCTGCATCTGTACTCCCATTCCCGCTGAGTGGGTTGGGCACAGCGGAGAGGCTGGGAGACAGTGTGGCATGCGTGTCCGTCTCCACAGTCAGACTAGGGTTAAGGTGGCTGATTCCGTTGGCCTGTGGTGGTGCCCATTTCTCAGGCTTCTCCTTCTCAGGCTCCTCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2571693 True 1374 lncRNA 0.41 1 8150311 8151684

Neighbor

gene id symbol gene type direction distance location
LOC110504508 LOC106612286 coding downstream 45566 8091034 ~ 8104745 (-)
LOC110504485 tgfbi coding downstream 223552 7896711 ~ 7926759 (-)
LOC110504484 smad5 coding downstream 258133 7871894 ~ 7892178 (-)
LOC110504356 LOC106612292 coding downstream 279212 7858125 ~ 7871099 (-)
LOC110504483 LOC106612297 coding downstream 300441 7835243 ~ 7849870 (-)
LOC110504516 LOC106612282 coding upstream 21537 8173221 ~ 8224552 (-)
LOC110504517 LOC106604175 coding upstream 97848 8249532 ~ 8264238 (-)
LOC110504538 g3bp1 coding upstream 465280 8616964 ~ 8627201 (-)
sparc sparc coding upstream 485904 8637588 ~ 8656945 (-)
LOC110504555 atox1 coding upstream 527067 8678751 ~ 8681239 (-)
G2248708 LOC106612280 non-coding downstream 393 8149547 ~ 8149918 (-)
G2248521 NA non-coding downstream 110662 8039444 ~ 8039649 (-)
G2248519 NA non-coding downstream 111027 8039044 ~ 8039284 (-)
G2248514 NA non-coding downstream 114092 8036008 ~ 8036219 (-)
G2248510 NA non-coding downstream 125400 8022320 ~ 8024911 (-)
G2248710 NA non-coding upstream 1693 8153377 ~ 8153688 (-)
G2248668 LOC106612284 non-coding upstream 4934 8153911 ~ 8157963 (-)
G2248711 NA non-coding upstream 7200 8158884 ~ 8159274 (-)
G2248712 NA non-coding upstream 7789 8159473 ~ 8160386 (-)
G2248713 NA non-coding upstream 9389 8161073 ~ 8161952 (-)
G2248522 NA other downstream 108831 8040876 ~ 8041480 (-)
G2247813 NA other downstream 894371 7255344 ~ 7255940 (-)
G2247565 NA other downstream 1125772 6938623 ~ 7024539 (-)
G2247416 NA other downstream 1279211 6870587 ~ 6871100 (-)
G2246314 NA other downstream 2297712 5848119 ~ 5852599 (-)
c1qtnf2 c1qtnf2 other upstream 995107 9145591 ~ 9148916 (-)
G2249506 NA other upstream 998204 9149888 ~ 9150141 (-)
G2250247 NA other upstream 1800633 9952317 ~ 9952703 (-)
G2250775 NA other upstream 2374107 10525791 ~ 10526568 (-)

Expression


Co-expression Network