G2248712


Basic Information

Item Value
gene id G2248712
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 8159473 ~ 8160386 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2571698
GTCAATACCTTTTAACATCTGTCAATACCTTTTAATATATGTCAATACCATTTAATATCTGTCAATACCTTTTAATATCTGTCAATACCTTTTAATATCTGTCAATACCTTTTAACATCTGTCAATACCTTTTAACATCTGTCAATACCTTTTAATATATGTCAATACCATTTAATATCTGTCAATACCTTTTAATATCTGTCAATACCTTTTAATATCTGTCAATACCATTTAATATATGTCAATACCTTTTAATATCTGTCAATACCTTTTAATATCTGTCAATACCATTTAATATCTGTCAATACCTTTTAATATCTGTCAATACCTTTTAATATCTGTCAATACCTTTTAATATATTTCAATACCTTTTCATATCTGTCAATACCTTTTAATATCTTTCAATACCTGTCAATGCCTTTCAATACTTTTCAATACCGACACTGAGCCTTCTTTTGGAAAAAGTTGTATCAGATTGGAGAACATCTTAGAAGGGTTAATAGACTATTCCTCCAAACAGAATCTTTCCAGACTGTTGATATCCTTTATCTGCACTCATGGATTGCCCTATAACTCAAACCGCAGGTTTACAattgtttaatttaatttaaatgtaacctttaactaggcaagtaagttaagaagaaattgttatttacaatgacggcctaccccggccaaacctggatgacgctggggccaattgtgcaccgccctacggGAGTCccaatgtgatacagcctggggtGTCTGGAGATTGAAATGGCCATTACAAAATGTTAGTTTTGTGGTTAATAAACCATTTCTTAATAAACCATTACTACATTCGATTCCTCTTTTcaacaccatattttacagtaagtGTGGGGTTCTTTACTACATTCGATTCCTCTTTTcaacaccatattttacag

Function

NR:

description
PREDICTED: probable maltase-glucoamylase 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2571698 True 914 lncRNA 0.32 1 8159473 8160386

Neighbor

gene id symbol gene type direction distance location
LOC110504508 LOC106612286 coding downstream 54728 8091034 ~ 8104745 (-)
LOC110504485 tgfbi coding downstream 232714 7896711 ~ 7926759 (-)
LOC110504484 smad5 coding downstream 267295 7871894 ~ 7892178 (-)
LOC110504356 LOC106612292 coding downstream 288374 7858125 ~ 7871099 (-)
LOC110504483 LOC106612297 coding downstream 309603 7835243 ~ 7849870 (-)
LOC110504516 LOC106612282 coding upstream 12835 8173221 ~ 8224552 (-)
LOC110504517 LOC106604175 coding upstream 89146 8249532 ~ 8264238 (-)
LOC110504538 g3bp1 coding upstream 456578 8616964 ~ 8627201 (-)
sparc sparc coding upstream 477202 8637588 ~ 8656945 (-)
LOC110504555 atox1 coding upstream 518365 8678751 ~ 8681239 (-)
G2248711 NA non-coding downstream 199 8158884 ~ 8159274 (-)
G2248668 LOC106612284 non-coding downstream 1510 8153911 ~ 8157963 (-)
G2248710 NA non-coding downstream 5785 8153377 ~ 8153688 (-)
G2248707 NA non-coding downstream 7789 8150311 ~ 8151684 (-)
G2248708 LOC106612280 non-coding downstream 9555 8149547 ~ 8149918 (-)
G2248713 NA non-coding upstream 687 8161073 ~ 8161952 (-)
G2248714 NA non-coding upstream 2479 8162865 ~ 8164105 (-)
G2248715 NA non-coding upstream 3783 8164169 ~ 8164693 (-)
G2248716 NA non-coding upstream 4483 8164869 ~ 8165404 (-)
G2248717 NA non-coding upstream 7398 8167784 ~ 8172279 (-)
G2248522 NA other downstream 117993 8040876 ~ 8041480 (-)
G2247813 NA other downstream 903533 7255344 ~ 7255940 (-)
G2247565 NA other downstream 1134934 6938623 ~ 7024539 (-)
G2247416 NA other downstream 1288373 6870587 ~ 6871100 (-)
c1qtnf2 c1qtnf2 other upstream 986405 9145591 ~ 9148916 (-)
G2249506 NA other upstream 989502 9149888 ~ 9150141 (-)
G2250247 NA other upstream 1791931 9952317 ~ 9952703 (-)
G2250775 NA other upstream 2365405 10525791 ~ 10526568 (-)
G2251534 NA other upstream 2536806 10697192 ~ 10698407 (-)

Expression


Co-expression Network