Gene
RNA
| Item | Value |
|---|---|
| gene id | G2249512 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 9156621 ~ 9156986 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2572687 | True | 366 | lncRNA | 0.36 | 1 | 9156621 | 9156986 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504364 | ccdc69 | coding | upstream | 218971 | 8901765 ~ 8937650 (+) |
| LOC118946015 | NA | coding | upstream | 236394 | 8918493 ~ 8920227 (+) |
| LOC118946014 | NA | coding | upstream | 239174 | 8912720 ~ 8917447 (+) |
| LOC118946016 | NA | coding | upstream | 249662 | 8903750 ~ 8906959 (+) |
| LOC110504544 | LOC106612256 | coding | upstream | 411951 | 8681832 ~ 8744670 (+) |
| LOC110504529 | pp2aa | coding | downstream | 54831 | 9211817 ~ 9221226 (+) |
| LOC110504533 | sfxn1 | coding | downstream | 67046 | 9224032 ~ 9248966 (+) |
| nudcd2 | nudcd2 | coding | downstream | 391401 | 9548387 ~ 9552601 (+) |
| gdf9 | LOC106612229 | coding | downstream | 427260 | 9584246 ~ 9590828 (+) |
| LOC110504554 | LOC106604229 | coding | downstream | 443092 | 9600078 ~ 9602977 (+) |
| G2249504 | NA | non-coding | upstream | 6347 | 9149428 ~ 9150274 (+) |
| G2249431 | c1qtnf2 | non-coding | upstream | 9911 | 9145497 ~ 9146710 (+) |
| G2249425 | NA | non-coding | upstream | 23485 | 9132891 ~ 9133136 (+) |
| G2249422 | NA | non-coding | upstream | 39318 | 9116961 ~ 9117303 (+) |
| G2249421 | LOC106612241 | non-coding | upstream | 40213 | 9116109 ~ 9116408 (+) |
| G2249513 | NA | non-coding | downstream | 3108 | 9160094 ~ 9163266 (+) |
| G2249544 | NA | non-coding | downstream | 43254 | 9200240 ~ 9200697 (+) |
| G2249547 | NA | non-coding | downstream | 45385 | 9202371 ~ 9202609 (+) |
| G2249566 | NA | non-coding | downstream | 101191 | 9258177 ~ 9262805 (+) |
| G2249590 | NA | non-coding | downstream | 162340 | 9319326 ~ 9319637 (+) |
| G2249418 | LOC106612241 | other | upstream | 45299 | 9106708 ~ 9111322 (+) |
| G2249058 | NA | other | upstream | 322246 | 8831981 ~ 8834375 (+) |
| G2247754 | NA | other | upstream | 1919692 | 7236526 ~ 7236929 (+) |
| G2247747 | NA | other | upstream | 1931775 | 7224214 ~ 7224846 (+) |
| G2247687 | NA | other | upstream | 2021363 | 7132731 ~ 7135258 (+) |
| G2249775 | NA | other | downstream | 324694 | 9481680 ~ 9557467 (+) |
| G2249785 | LOC106604237 | other | downstream | 329259 | 9486245 ~ 9486922 (+) |
| G2250462 | NA | other | downstream | 1071934 | 10228920 ~ 10229999 (+) |
| G2251174 | NA | other | downstream | 2039614 | 11196600 ~ 11199436 (+) |
