G2252241


Basic Information

Item Value
gene id G2252241
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 12128151 ~ 12128643 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2576041
GGAACGGTGACTAGATCCAACCGacattgcttttcccagtctGCGAGACCAGGTCAGTAGTCTTTATTCTCGAATTTGGGGGGATGATTTAAGATATCTTTGCTTTGATGTTCTAAGTTTTAGAATTTATCAATAATAGGaacttaactttttatggctgcaggggcagtattgattagcttggatgaaaggtgcccatttcaaacggcctgctcctcagtcatagttgctaatatttgcatattattagtagtattggatagaaaacactctgacgtttctaaaactgtttgaatgatgtctgtgagtataacagaactcatattggcaggcaaaatcctgagttgaaatcaaaacaggaagtcagaaatctgagcttgtatgtattcaccagagtccccaatgaaatccccttgagatatgaatgatgttgcactgcctaggggttccactagatgtcaaccatcaatagaaattataatgaggcttctat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2576041 True 493 lncRNA 0.39 1 12128151 12128643

Neighbor

gene id symbol gene type direction distance location
arhgef9b LOC106612186 coding upstream 23493 12024777 ~ 12104658 (+)
LOC118946000 NA coding upstream 437960 11689493 ~ 11690191 (+)
LOC110504367 LOC106612214 coding upstream 755034 11362386 ~ 11373117 (+)
fhdc2 LOC106612215 coding upstream 768624 11325225 ~ 11359527 (+)
cetn2 LOC106612201 coding upstream 946436 11175508 ~ 11181715 (+)
LOC110504575 LOC106604268 coding downstream 31097 12159740 ~ 12170990 (+)
LOC110504580 LOC106604267 coding downstream 43652 12172295 ~ 12209703 (+)
LOC110504592 NA coding downstream 427346 12555989 ~ 12577114 (+)
LOC110504589 LOC106612129 coding downstream 436540 12565183 ~ 12567051 (+)
nek12 LOC106612157 coding downstream 467115 12595758 ~ 12598268 (+)
G2252172 NA non-coding upstream 1057 12126636 ~ 12127094 (+)
G2252240 NA non-coding upstream 9851 12117868 ~ 12118300 (+)
G2252239 LOC106604272 non-coding upstream 10477 12116860 ~ 12117674 (+)
G2252166 NA non-coding upstream 20607 12105950 ~ 12107544 (+)
G2252226 NA non-coding upstream 60691 12067260 ~ 12067460 (+)
G2252243 NA non-coding downstream 3495 12132138 ~ 12132567 (+)
G2252245 NA non-coding downstream 5648 12134291 ~ 12134502 (+)
G2252246 NA non-coding downstream 5965 12134608 ~ 12134871 (+)
G2252247 NA non-coding downstream 7494 12136137 ~ 12136823 (+)
G2252248 NA non-coding downstream 10042 12138685 ~ 12139256 (+)
G2251155 ogt other upstream 833147 11216675 ~ 11295004 (+)
G2251181 NA other upstream 914183 11213326 ~ 11213968 (+)
G2251174 NA other upstream 928715 11196600 ~ 11199436 (+)
G2250462 NA other upstream 1898152 10228920 ~ 10229999 (+)
LOC110504554 LOC106604229 other upstream 2525199 9600078 ~ 9602977 (+)
G2252269 NA other downstream 91117 12219760 ~ 12225495 (+)
G2252277 NA other downstream 115050 12243693 ~ 12244026 (+)
G2252383 NA other downstream 319252 12447895 ~ 12448732 (+)
G2252822 NA other downstream 487662 12616305 ~ 12616677 (+)
G2253021 NA other downstream 852661 12981304 ~ 12981975 (+)

Expression


Co-expression Network