G2254141


Basic Information

Item Value
gene id G2254141
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 14186262 ~ 14240532 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2578294
gcctttccgttcaccttcccactcctgggccagactacactcaataatatgacccactgaagagatgagtcttcagtaaagacttaaaggtagagaccgagtctgcgtctctcacatgggtaggcagaccattccataaaaatggagctcaatAGGAggaagccctgcctccagctgtttacttagaaattctagggacaattaggaggcctgcgtcttgtgaccgtagcgtacgtgtaggtatgtacggcaggaccaaatcagagagataggtaggagcaagcccatgtaatgtttgtaggttagcagtaaaaccttaatcagcccttgccttaacaggaagccagtgtagagaggctagcactggagtaatatgatcaaatttcttggttctagtcaggattctagcagccgtatttagcactaactgaagttgatttagtgctttatccgggtagccggaaagtagagctttgcagtagtctaacctagaagtaacaaaagcatggattaatttttctgcatcatttttgaacagaaagtttctgatttttgcaatgttacgtagatggaaaaaagctgtccttgaaacagtcttgatatgttcgtcaaaagagagatcagggtccagagtaacgccgaggtccttcacagttttatttgagacgactgtacaaccatcaagattaattgtcagattcaacagaagatctctttgtttcttgggacctagaacaataatctctgttttgtccgagtttaaaagtagaaagtttgcagccatccacttccttatgtctgaaacagacttctagcgagggcaattttggggcttcaccatgtacatctcctgtcagtgttaaaTCCCCCCGAGGCCCActttcagttcacacagacacaatggAGTTATATGAaccctctattctgttgcataaaacaaccatttgatgcaattacAGCATTATAAAATAATTCTGCTctcacagcagagtacagtaaagCAGTGCATGGTTCTGTAGAGTTCAATAAAGCAGTGCATGGttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagTGCATGGTTCTGTATAGTTCAGTAAAGCAGTGCATAGttctgtagagttcagtaaagcagTGCATAGTTCTGTAGAGTTCAATAAAGCAGTGCATGGttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcgGTGCATGGTTCTGTAGAGTTCAATAAAGCAGTGCATGGTTCTGTAGAGTTCAATAAAGCAGTGCATGGttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatagttctgtagagtacagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatagttctgtagagtacagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatggttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcagtgcatagttctgtagagttcagtaaagcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2578294 True 2594 lncRNA 0.42 2 14186262 14240532
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110504628 LOC106612134 coding upstream 50526 14124717 ~ 14135736 (+)
n4bp3 LOC106612138 coding upstream 183804 13903147 ~ 14002458 (+)
LOC110504375 LOC106612125 coding upstream 390468 13725351 ~ 13795794 (+)
LOC110504625 LOC106612141 coding upstream 465474 13617091 ~ 13720788 (+)
LOC118946051 NA coding upstream 793532 13384814 ~ 13392730 (+)
LOC110504632 cystm1 coding downstream 16992 14257524 ~ 14287775 (+)
LOC118946005 NA coding downstream 263630 14504162 ~ 14569236 (+)
LOC118946006 LOC106612054 coding downstream 1171434 15411966 ~ 15414423 (+)
LOC110504636 LOC106612059 coding downstream 1289136 15529668 ~ 15531598 (+)
lonrf1 LOC106612058 coding downstream 1305185 15545717 ~ 15568989 (+)
G2254126 NA non-coding upstream 41826 14144231 ~ 14144436 (+)
G2254095 NA non-coding upstream 45166 14140881 ~ 14141096 (+)
G2254101 NA non-coding upstream 106813 14079135 ~ 14079449 (+)
G2254100 NA non-coding upstream 108269 14077670 ~ 14077993 (+)
G2254089 NA non-coding upstream 111782 14074007 ~ 14074480 (+)
G2254097 NA non-coding downstream 3590 14244122 ~ 14244467 (+)
G2254164 NA non-coding downstream 14351 14254883 ~ 14255091 (+)
G2254172 NA non-coding downstream 41481 14282013 ~ 14282823 (+)
G2254371 NA non-coding downstream 48908 14289440 ~ 14289655 (+)
G2254379 NA non-coding downstream 58839 14299371 ~ 14299672 (+)
G2254068 NA other upstream 158997 14025235 ~ 14027265 (+)
G2253166 LOC106612148 other upstream 1128655 13003196 ~ 13057607 (+)
G2253021 NA other upstream 1204287 12981304 ~ 12981975 (+)
G2252822 NA other upstream 1569585 12616305 ~ 12616677 (+)
G2252383 NA other upstream 1737530 12447895 ~ 12448732 (+)
G2254730 NA other downstream 467853 14708385 ~ 14745550 (+)
G2255474 NA other downstream 1147099 15387631 ~ 15387977 (+)
G2255525 NA other downstream 1195376 15435899 ~ 15439196 (+)
G2256147 NA other downstream 1945381 16185913 ~ 16186224 (+)
G2256165 LOC106612074 other downstream 1996227 16236759 ~ 16237744 (+)

Expression

G2254141 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
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G2254141 Expression in each Bioproject

Bar chart with 20 bars.
G2254141 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network