Gene
RNA
| Item | Value |
|---|---|
| gene id | G2257341 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 16553913 ~ 16558524 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2582165 | False | 382 | lncRNA | 0.37 | 2 | 16553913 | 16555054 |
| TU2582169 | False | 612 | lncRNA | 0.36 | 2 | 16553913 | 16556728 |
| TU2582168 | True | 606 | lncRNA | 0.33 | 3 | 16554461 | 16558524 |
16,548,000
16,549,000
16,550,000
16,551,000
16,552,000
16,553,000
16,554,000
16,555,000
16,556,000
16,557,000
16,558,000
16,559,000
16,560,000
16,561,000
NC_050571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504669 | LOC106612087 | coding | downstream | 1737 | 16459864 ~ 16552176 (-) |
| LOC110504680 | LOC106612085 | coding | downstream | 35839 | 16501304 ~ 16518074 (-) |
| LOC110504667 | LOC106612080 | coding | downstream | 110637 | 16437786 ~ 16443276 (-) |
| LOC110504639 | LOC106604374 | coding | downstream | 120179 | 16376297 ~ 16433734 (-) |
| LOC110504640 | LOC106612074 | coding | downstream | 290336 | 16234313 ~ 16263577 (-) |
| LOC110504676 | LOC106612091 | coding | upstream | 40016 | 16598540 ~ 16600886 (-) |
| nudt22 | nudt22 | coding | upstream | 58376 | 16616900 ~ 16620652 (-) |
| LOC110504678 | LOC106612097 | coding | upstream | 102428 | 16660952 ~ 16664449 (-) |
| LOC118946009 | NA | coding | upstream | 175319 | 16733843 ~ 16735589 (-) |
| LOC110504653 | LOC106612100 | coding | upstream | 180008 | 16719521 ~ 16819520 (-) |
| G2257282 | LOC106604382 | non-coding | downstream | 8725 | 16542126 ~ 16545188 (-) |
| G2257271 | NA | non-coding | downstream | 13556 | 16538449 ~ 16540357 (-) |
| G2257337 | NA | non-coding | downstream | 38545 | 16509356 ~ 16515368 (-) |
| G2257323 | NA | non-coding | downstream | 73858 | 16479569 ~ 16480055 (-) |
| G2257281 | NA | non-coding | upstream | 86114 | 16644638 ~ 16646013 (-) |
| G2257375 | NA | non-coding | upstream | 94313 | 16652837 ~ 16703581 (-) |
| G2257409 | NA | non-coding | upstream | 142224 | 16700748 ~ 16701181 (-) |
| G2257440 | NA | non-coding | upstream | 197957 | 16756481 ~ 16822407 (-) |
| LOC110504385 | gria1 | other | downstream | 910793 | 15627780 ~ 15813695 (-) |
| G2255363 | NA | other | downstream | 1280305 | 15272878 ~ 15273608 (-) |
| G2255168 | NA | other | downstream | 1443280 | 15110233 ~ 15110633 (-) |
| G2254275 | NA | other | downstream | 2454156 | 14099389 ~ 14099757 (-) |
| G2253906 | NA | other | downstream | 2713224 | 13798351 ~ 13840689 (-) |
| LOC110504656 | psd2 | other | upstream | 417075 | 16920549 ~ 16990970 (-) |
| LOC110504684 | UBE2D2 | other | upstream | 496514 | 17055003 ~ 17061580 (-) |
| G2257651 | NA | other | upstream | 787362 | 17264357 ~ 17349631 (-) |
| cnot7 | LOC103366853 | other | upstream | 1487389 | 18036030 ~ 18047530 (-) |
