Gene
RNA
| Item | Value |
|---|---|
| gene id | G2258572 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 18963804 ~ 18964029 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2583678 | True | 226 | lncRNA | 0.53 | 1 | 18963804 | 18964029 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| st3gal5 | st3gal5 | coding | upstream | 13044 | 18936856 ~ 18950760 (+) |
| polr1a | polr1a | coding | upstream | 28780 | 18923789 ~ 18935024 (+) |
| immt | immt | coding | upstream | 47743 | 18896899 ~ 18916061 (+) |
| rnf103 | rnf103 | coding | upstream | 69064 | 18890000 ~ 18894740 (+) |
| abhd18 | abhd18 | coding | upstream | 74570 | 18883441 ~ 18889234 (+) |
| tmem129 | tmem129 | coding | downstream | 15170 | 18979199 ~ 18982891 (+) |
| LOC110504743 | slbp | coding | downstream | 20405 | 18984434 ~ 18988046 (+) |
| ccdc142 | ccdc142 | coding | downstream | 24262 | 18988291 ~ 18995055 (+) |
| nkx1.2lb | nkx1-1 | coding | downstream | 174014 | 19138043 ~ 19145172 (+) |
| LOC110504746 | ctbp1 | coding | downstream | 218633 | 19182662 ~ 19200820 (+) |
| G2258571 | NA | non-coding | upstream | 389 | 18963173 ~ 18963415 (+) |
| G2258528 | NA | non-coding | upstream | 110895 | 18852365 ~ 18852909 (+) |
| G2258479 | NA | non-coding | upstream | 151744 | 18763539 ~ 18812060 (+) |
| G2258447 | NA | non-coding | upstream | 274152 | 18686593 ~ 18689652 (+) |
| G2258436 | NA | non-coding | upstream | 306078 | 18657434 ~ 18657726 (+) |
| G2258993 | NA | non-coding | downstream | 104564 | 19068593 ~ 19068825 (+) |
| G2259010 | NA | non-coding | downstream | 116348 | 19080377 ~ 19080583 (+) |
| G2259026 | NA | non-coding | downstream | 131708 | 19095737 ~ 19096085 (+) |
| G2259028 | NA | non-coding | downstream | 132104 | 19096133 ~ 19096574 (+) |
| G2259030 | NA | non-coding | downstream | 134770 | 19098799 ~ 19099041 (+) |
| micu3b | LOC106612036 | other | upstream | 953009 | 17971133 ~ 18010807 (+) |
| G2256867 | NA | other | upstream | 1517874 | 17445566 ~ 17445930 (+) |
| G2256788 | NA | other | upstream | 1613459 | 17291119 ~ 17350345 (+) |
| G2256591 | LOC106594957 | other | upstream | 2129960 | 16828805 ~ 16833844 (+) |
| G2256563 | LOC106612100 | other | upstream | 2185779 | 16776894 ~ 16778025 (+) |
| LOC110504399 | LOC106611959 | other | downstream | 1623662 | 20587691 ~ 20876250 (+) |
| G2261028 | NA | other | downstream | 1982704 | 20946733 ~ 20947525 (+) |
| G2261334 | NA | other | downstream | 2478627 | 21442656 ~ 21443007 (+) |
| G2261414 | fchsd1 | other | downstream | 2787786 | 21751815 ~ 21772260 (+) |
| LOC110504779 | LOC106612009 | other | downstream | 2983795 | 21947801 ~ 21953127 (+) |
