Gene
RNA
| Item | Value |
|---|---|
| gene id | G2261388 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 21523595 ~ 21523872 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2586757 | True | 278 | lncRNA | 0.39 | 1 | 21523595 | 21523872 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504765 | LOC106611985 | coding | upstream | 507604 | 21010125 ~ 21015991 (+) |
| LOC110504763 | LOC106611989 | coding | upstream | 538219 | 20958946 ~ 20985376 (+) |
| LOC110504399 | LOC106611959 | coding | upstream | 647345 | 20587691 ~ 20876250 (+) |
| fmr1 | LOC106611992 | coding | upstream | 953138 | 20561652 ~ 20570457 (+) |
| LOC118946045 | NA | coding | upstream | 966857 | 20553416 ~ 20556738 (+) |
| LOC110504401 | LOC106611981 | coding | downstream | 34728 | 21558600 ~ 21690698 (+) |
| LOC110504768 | LOC106611982 | coding | downstream | 178195 | 21702067 ~ 21713619 (+) |
| rell2 | LOC106611958 | coding | downstream | 203259 | 21727131 ~ 21742081 (+) |
| LOC110504772 | LOC106611979 | coding | downstream | 264798 | 21788670 ~ 21798544 (+) |
| LOC110504773 | LOC106611978 | coding | downstream | 275551 | 21799423 ~ 21857880 (+) |
| G2261382 | NA | non-coding | upstream | 11444 | 21511890 ~ 21512151 (+) |
| G2261369 | NA | non-coding | upstream | 28829 | 21494525 ~ 21494766 (+) |
| G2261366 | NA | non-coding | upstream | 30894 | 21492425 ~ 21492701 (+) |
| G2261363 | NA | non-coding | upstream | 38302 | 21484722 ~ 21485293 (+) |
| LOC110504767 | LOC106611984 | non-coding | upstream | 61535 | 21116128 ~ 21549042 (+) |
| G2261390 | NA | non-coding | downstream | 7019 | 21530891 ~ 21531098 (+) |
| G2261392 | NA | non-coding | downstream | 8519 | 21532391 ~ 21532660 (+) |
| G2261447 | NA | non-coding | downstream | 91166 | 21615038 ~ 21616432 (+) |
| G2261461 | NA | non-coding | downstream | 139721 | 21663593 ~ 21663833 (+) |
| G2261470 | NA | non-coding | downstream | 158246 | 21682118 ~ 21682464 (+) |
| G2261334 | NA | other | upstream | 80588 | 21442656 ~ 21443007 (+) |
| G2261028 | NA | other | upstream | 576070 | 20946733 ~ 20947525 (+) |
| micu3b | LOC106612036 | other | upstream | 3512800 | 17971133 ~ 18010807 (+) |
| G2256867 | NA | other | upstream | 4077665 | 17445566 ~ 17445930 (+) |
| G2261414 | fchsd1 | other | downstream | 227943 | 21751815 ~ 21772260 (+) |
| LOC110504779 | LOC106612009 | other | downstream | 423952 | 21947801 ~ 21953127 (+) |
| G2261587 | NA | other | downstream | 484240 | 22008112 ~ 22008748 (+) |
| G2262601 | NA | other | downstream | 745846 | 22269718 ~ 22273707 (+) |
| G2263926 | NA | other | downstream | 2001468 | 23525340 ~ 23526020 (+) |
