G2261414 (fchsd1)


Basic Information

Item Value
gene id G2261414
gene name fchsd1
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 21751815 ~ 21772260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2586787
AGGGGAGCGGCCCTGCTGCCTCTTGGAATGTTCTGATGAGGAGCTGGAACTGTTGAAGGACCAGTCCAGCTGGGGACAAGGGAAGCCCTGCGCCAGGCAGACAGAAGAGCCCTCTCCTGGTGACCACAGGAACTGCAGGTACCTCTCAGGGACGTAGCCAACCTGGCCTGCTGCATTACGGGCCTTCAGCCAGTCCTCCATGTCTCCATCCTCTATCACCTGAAGCTCTTCTCCCTCTGTGATTGACAGCTCATCTCCTTGGCAGGCCTGATAGCTGTAGAGAACCATGCAAGCCAAGGGGTATCCACACGGCACCGAGCAGGAAGTTGAATCGATGAAAGTGTCACCATCTTCATCGTAGTCGTCGAAGTCTGTGAACTCAAACTCGTCCTCGGAGATATCTCCGTTGGACATGCGTGCCTCGCTCAGCCTCCTGTCCCTCTCCAGCTCCTCGTCTGCCTGGGTCATAGCACTGCTCACCCATGGCTCCACGTCCACCCCCGCCGACGCCAGCAGCGCCAGCCTGGACTCCGCCTTCACCCGGCTcacCTGTGCTTTCCTCACACTCTCCTTCACCCCCACCATCTTCTGTTCCACGCTGACTCCTGTGTCTCCTGACAGCAGTTTGAAACGCCTGTCCAGCATCTGCAGTGCCCTATCTCCGTGTGAGATGATCTTGTAGTCTTTGGCAGCCTTAGCAGACCACTTGCGGGCCTCCTTGTCCAAACAGCTCTCCCCCTCAGCACTGGAGCTATGTTGCTTCAGAATGCACACCTTGTCTTTAGGGGCAACCTGGAAGTGAAAGCCGGCTGTTCTGGTGAAGACCGGGTACTCCTGGAGGAATATCTGGATGTTCTGTTCTCTAGACACCTTGGTGTAGTTCTCGCAGATCTTGCTAAAGTTACTATGCGTTGACCGGCAGGTGTCGATCTCTGTGCAGCACAAGAGAGTGAAGTGTTCTCGGATTTGCTCATACAGGTCACTGTCCAGTCTCCTCATGATGGCAGGCAGCTCTGCAGTGTAGTAGTACTGGTGATGAGAGTTGACGGCAGACAGTGTTAGAAGGTACTCATTACGCACCTCTGTCAGTCTCTGGTCACACTCCCTCAGCCTGGTATTCAGCTTTGAACTCATTTTCTGCAAGCCTGTCCTAAAATGGAAAATTCCATGGTCACTCTTCTTGAATTTGGCCTGTGCGTCAGCAGCTTTCTCCCTGGCCACGTTAGCCATGTGACTCAGCTGGTAGTATCTCTTCTTGACCTTGTGGAGCTCTCGTAGTGCATCCACTACCTCACCCTGTACTCTCTGCAGCTGCTCTAGACCCCTCTTGGCCTTCAGCTCCTTGGCTGCCCTCAGGCTCTTCAGAGCGTCGGCAGTGAGTGAGCGATATCCGTCGGCCGCCGTGAGACGACACACTCCACTCTGTGCCGTGGCCTCAATCAGAGACCTCCACACAGCAAACACACTCCCAGAGTTCAAAGAGTCTCCCTTGCCTCTTTGCCAGTCTTTCCTCTGGAACTGTATGGCCAGTCTCTGGAGGGCCTGACTGTACTCTTGTTCTATGGCAGCACGCTGTTTACTGAAGGACCTGATGTCCTCCAGCAGTTCTACCTCCTGCTGCTGTTTGCTCTGCAGCCGGCCCACTTGCTCCGCAAAGGCCATCTTCACCTGCTGGGTCTCCTTCACCTGTCAATCAAAACAGTGACACATACCTGTATCAGGACCGGCCAGCACCGGGACTAaataaaatctaagtttattCGTCACGTGCACAGTGGAT

Function

symbol description
fchsd1 Predicted to enable lipid binding activity. Predicted to be involved in neuromuscular synaptic transmission and positive regulation of actin filament polymerization. Predicted to be located in cell projection and perikaryon. Predicted to be active in neuromuscular junction and recycling endosome. Predicted to colocalize with cuticular plate.

NR:

description
F-BAR and double SH3 domains protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2586787 True 1780 TUCP 0.55 14 21751815 21772260
Loading

Neighbor

gene id symbol gene type direction distance location
rell2 LOC106611958 coding upstream 9734 21727131 ~ 21742081 (+)
LOC110504768 LOC106611982 coding upstream 38196 21702067 ~ 21713619 (+)
LOC110504401 LOC106611981 coding upstream 61117 21558600 ~ 21690698 (+)
LOC110504767 LOC106611984 coding upstream 202773 21116128 ~ 21549042 (+)
LOC110504765 LOC106611985 coding upstream 735824 21010125 ~ 21015991 (+)
LOC110504772 LOC106611979 coding downstream 16410 21788670 ~ 21798544 (+)
LOC110504773 LOC106611978 coding downstream 27163 21799423 ~ 21857880 (+)
LOC118946089 NA coding downstream 27797 21800057 ~ 21800257 (+)
LOC110504774 NA coding downstream 108497 21880757 ~ 21894472 (+)
LOC118946060 NA coding downstream 134198 21906458 ~ 21908569 (+)
G2261477 NA non-coding upstream 54080 21697455 ~ 21697735 (+)
G2261470 NA non-coding upstream 69351 21682118 ~ 21682464 (+)
G2261461 NA non-coding upstream 87982 21663593 ~ 21663833 (+)
G2261447 NA non-coding upstream 135383 21615038 ~ 21616432 (+)
G2261585 NA non-coding downstream 233056 22005316 ~ 22005672 (+)
G2261586 NA non-coding downstream 235509 22007769 ~ 22008033 (+)
G2261628 NA non-coding downstream 302513 22074773 ~ 22079653 (+)
G2262480 NA non-coding downstream 319649 22091909 ~ 22093471 (+)
G2261334 NA other upstream 308808 21442656 ~ 21443007 (+)
G2261028 NA other upstream 804290 20946733 ~ 20947525 (+)
LOC110504399 LOC106611959 other upstream 1088002 20587691 ~ 20876250 (+)
micu3b LOC106612036 other upstream 3741020 17971133 ~ 18010807 (+)
G2256867 NA other upstream 4305885 17445566 ~ 17445930 (+)
LOC110504779 LOC106612009 other downstream 175564 21947801 ~ 21953127 (+)
G2261587 NA other downstream 235852 22008112 ~ 22008748 (+)
G2262601 NA other downstream 497458 22269718 ~ 22273707 (+)
G2263926 NA other downstream 1753080 23525340 ~ 23526020 (+)
G2264115 NA other downstream 1925428 23697688 ~ 23711086 (+)

Expression

G2261414(fchsd1) Expression in all Baseline Samples

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G2261414(fchsd1) Expression in each Bioproject

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G2261414(fchsd1) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 10.
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Co-expression Network