Gene
RNA
| Item | Value |
|---|---|
| gene id | G2262506 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 22115199 ~ 22115470 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: extensin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2587983 | True | 272 | lncRNA | 0.63 | 1 | 22115199 | 22115470 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504784 | LOC106611969 | coding | upstream | 116620 | 21984645 ~ 21998579 (+) |
| LOC118946068 | NA | coding | upstream | 132327 | 21981136 ~ 21982872 (+) |
| LOC110504783 | LOC106611972 | coding | upstream | 137454 | 21975033 ~ 21977745 (+) |
| LOC110504782 | LOC106611971 | coding | upstream | 140352 | 21973044 ~ 21974847 (+) |
| LOC110504781 | LOC100136535 | coding | upstream | 143317 | 21968774 ~ 21971882 (+) |
| arhgef37 | LOC106611922 | coding | downstream | 560511 | 22675981 ~ 22694623 (+) |
| LOC110504406 | LOC106611923 | coding | downstream | 684250 | 22799720 ~ 22912448 (+) |
| slc26a2 | slc26a2 | coding | downstream | 838123 | 22953593 ~ 22966396 (+) |
| LOC118946027 | NA | coding | downstream | 888583 | 23004053 ~ 23014290 (+) |
| htr4 | LOC106611927 | coding | downstream | 932800 | 23048270 ~ 23138905 (+) |
| G2262496 | NA | non-coding | upstream | 6982 | 22107965 ~ 22108217 (+) |
| G2262494 | NA | non-coding | upstream | 8935 | 22106064 ~ 22106264 (+) |
| G2262493 | NA | non-coding | upstream | 9518 | 22105444 ~ 22105681 (+) |
| G2262480 | NA | non-coding | upstream | 21728 | 22091909 ~ 22093471 (+) |
| G2261628 | NA | non-coding | upstream | 35546 | 22074773 ~ 22079653 (+) |
| G2262526 | NA | non-coding | downstream | 21498 | 22136968 ~ 22137234 (+) |
| G2262549 | NA | non-coding | downstream | 52411 | 22167881 ~ 22171881 (+) |
| G2262578 | NA | non-coding | downstream | 96351 | 22211821 ~ 22253223 (+) |
| G2262657 | NA | non-coding | downstream | 296284 | 22411754 ~ 22412237 (+) |
| G2262678 | NA | non-coding | downstream | 331897 | 22447367 ~ 22451864 (+) |
| G2261587 | NA | other | upstream | 106451 | 22008112 ~ 22008748 (+) |
| LOC110504779 | LOC106612009 | other | upstream | 162080 | 21947801 ~ 21953127 (+) |
| G2261414 | fchsd1 | other | upstream | 342939 | 21751815 ~ 21772260 (+) |
| G2261334 | NA | other | upstream | 672192 | 21442656 ~ 21443007 (+) |
| G2261028 | NA | other | upstream | 1167674 | 20946733 ~ 20947525 (+) |
| G2262601 | NA | other | downstream | 154248 | 22269718 ~ 22273707 (+) |
| G2263926 | NA | other | downstream | 1409870 | 23525340 ~ 23526020 (+) |
| G2264115 | NA | other | downstream | 1582218 | 23697688 ~ 23711086 (+) |
| G2264113 | LOC100136700 | other | downstream | 1740139 | 23855609 ~ 23863973 (+) |
| G2264210 | LOC106582338 | other | downstream | 1765311 | 23880781 ~ 23881032 (+) |
