G2264115


Basic Information

Item Value
gene id G2264115
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 23697688 ~ 23711086 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2589732
tgggggggggggggggggccgaatactttcgcaaggcactgtaaatggtgCTCTTCCACAGACTCTCGCTCAGGGAACCATTTGTCTTactctttaaaaaaacatagacCCTCTTGACTGTGCATCATACTGTCCAATTAGCCTGCTAAATGTTGACTATAAAATTCTAGCCAAACTTCTGGCAACGCGTCTGGAAACAGTCCTCCCATCAATTATCTCACCGGATCAAAAAGGATTTATTAAAAATAGACACTCATTCTTCAATCTTCGAAGATGATTTAATATTATATCATCCTTCTGTCGTCAATACCTCTGAAGCCGTTATATCCCTGGATGTGGAGAAAGCGTTTGATCGGGTGGAATGGAAATACCTTTTTTCATTCCAAATAAATTTGCCTTTGGCTCCAAATTCATGGCTAGGATAAGACTTCTGTACTCGTCCCCTCAAACCTCTGTCAGGACTAATAACAGTCAATCAGACCACCTCCCTTTGCAACGATCGACACGCCAGGGTTGCCCTTTAAGTCCCTTACTGTTTGCCCTCGCCATAGAACCACTTGCAATAACACTTCGCTCCAACCCCCTTATCAAAGATATAGTCAGATATACGGACACGAACACAAATTGTCTTTATATGCAGATTATTTATTATTATACACATCCAAcctttctgtctctgttcctGCTGCCCTTGCCACTTTTGCATCGTTCGGTCACTTACCAGGGTCTCAGTAAAATCGAATTGATGCCGCTGATTATGGCCACAAAAAATTCCCCTCTACATAACATTTAACATGGCTCACAATAGTTTTATCTAGGGGTACATGTCACAATCAGATTTGAAAACCTTTTTCATGCCAACTTTGCTCCTCTTTTAACCCGTATTAAGGATGATTTGGAATGCTGGTCTTTGCTACAACTCTCCTTAGTCGCAATAATTAATTCAATTAAAATGAATACTCTCCCTAAATTCTTATTTCTATCAGTGCCTTCCGATTTTTCTTcccaatacatttttcaaaaagaTCGACAGCCTAATACTACCCTTTATATGGGACAAAAATCCCCCCAGGATGCGAAAACAGCTTTTGCAGAGGCCCAAACCAGACAGCGGTCTAGCTCTAACGGACTTCAGAATCTATTATTGGGCCACTAACCTTAGGATCATTCACTACTGGTTGCAGAGCAGAGAGAAATTCCCACCCCTAATTTGGCTAGAGATGTAGGCCGCCTCGTCTATACCGGCATCATTGTCTTCCCTCGCTCACTCCTCCGTTACAGACCCTTACTCCTCCTTCACCAAAAATATGTGTCAAGACAACATTGAAGATCCGGAATCAATTTAGGCGCCACTTTGGGTTTCAAACAACCTCTTCTTTGGATGCGGTGGCCTCAAACCCAGTCTTTCCCCCATCTATGGTTGATGGTGCTTTCTCAACATGATCTAGTCCCAGTATTAAAATATTCAGATATCTATTATTAACAATACATTTAATATGTTTGAACAATTATCAAGCAAATTTGGTCTCCCCAGACATCATTTTTTTAGGTTCTTACAAGTCTGGAGTTACATCAACAGCATAGATCCAGGATTCCCCACCCTTCCTTGTGAAACCCAGTTCGACATTTCTTGTCCCACTTCGTACTCTAAAAGGCACCTTGTCAATAATCTATAGGCAAATTTGCTCACTACAAGTCATCTCATTAAACAATATTAAATCCTCATGGGATGAGGAACTGGGTGAGGAAATATCTGATGAACTATGGGAAGGGGCACTCAAAAGGGTACATAGCTCTTCTATTTGCGCTCGACACGGCCTCATTCAATGCAAACTCTTGGGCCGACTGGACCAAAGCAAGATTATCCCAAATTTACAAGGATGCGAACCCTAATTGTGTACGATGTAATCAGTCTCCTGCTAATCATGTACACATGTTTTGGTGTTGCCCATCTCTTGTTGGTTTCTGGAAAGACATCTTTAACACACTCTCAGAATTAAGCGGCACAGAGATCGAGCCAGACCCTTTTACTGCATTATTTGGGGTTTCCTTACCCACAACACAATTGACAAATTAATAAGGATGTAATTGCCTTTGTCAGCGAGACGATTAATTTTACGTCGATGGAAATCCTCTGCAGCCCCTTCTCGTGCTCTTTGGATTAAATCTGTTTTGAATTGCATAAAGTTGAAAAGATTAAACACGCACTCAATGGGTCTGTAGACAAATTCTACAAATTCTATGCAAAGGCTCCCTTCTTTTCTTCTGTTAAACCAATACATTTCCCTGCAGTTCCAGAGtgatgtatatttatatattggTGACGTAAGAGGCCTGGTATGTGCATACACGACATCTCGGATGTTAAGGACGGTATTATCTGTACTAGATGACCCATAACAACtgtatcaaaatatatatttttccttattattttaattttgtatttacatttttatgtCTGCCTCTCTATGTTTTGCTGTATTGTTCTCttttatgtgttttttttatacTACTACCAAATAACTTACAAGTGCAATTATTTTCTAAATGCTGGTATTGAAAATTAAAcaaagtattatttttttttattattttttaaaaatctatgaacatttgaacatcttggccatgttctgttagaatctccacctggcacagccagactggccacccctcatagcctggttcctctctaggtttcttcctaggttctggccttcctaaggagtttttcctagccaccgtgcttctacatctgtattgtttggggttttaggctgagtttctgtacagcactttgtgacagcagctgatgtaagaagggctttataaatacatttgattgattgattacagTTCGGCATGTACATCATTGTTATCAGGAAATGATTTGTAAAATGCTATTgaaataaaaacagctgcattgaaTAGAATTTCACTGA

Function

NR:

description
Retrovirus-related Pol polyprotein LINE-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2589732 True 2945 TUCP 0.40 2 23697688 23711086

Neighbor

gene id symbol gene type direction distance location
LOC110504798 NA coding upstream 17054 23675075 ~ 23680634 (+)
htr4 LOC106611927 coding upstream 558783 23048270 ~ 23138905 (+)
LOC118946027 NA coding upstream 683398 23004053 ~ 23014290 (+)
slc26a2 slc26a2 coding upstream 731292 22953593 ~ 22966396 (+)
LOC110504406 LOC106611923 coding upstream 785240 22799720 ~ 22912448 (+)
LOC110504805 LOC100691570 coding downstream 125808 23836618 ~ 23842418 (+)
LOC110504821 LOC106611869 coding downstream 1141947 24853033 ~ 24856333 (+)
LOC110504822 LOC106611910 coding downstream 1293187 25004273 ~ 25011653 (+)
LOC110504823 LOC106604841 coding downstream 1354402 25065488 ~ 25080226 (+)
LOC110504826 LOC106611870 coding downstream 1380546 25091632 ~ 25181408 (+)
G2264105 NA non-coding upstream 45541 23651948 ~ 23652147 (+)
G2264103 NA non-coding upstream 46276 23650831 ~ 23651412 (+)
G2263856 LOC106611930 non-coding upstream 291463 23403108 ~ 23406225 (+)
G2263854 NA non-coding upstream 298699 23398711 ~ 23398989 (+)
G2263806 NA non-coding upstream 333164 23363476 ~ 23364524 (+)
G2264122 NA non-coding downstream 858 23711944 ~ 23712528 (+)
G2264135 NA non-coding downstream 4600 23715686 ~ 23715893 (+)
G2264155 NA non-coding downstream 40123 23751209 ~ 23760480 (+)
G2264174 NA non-coding downstream 83504 23794590 ~ 23794938 (+)
G2264175 NA non-coding downstream 84493 23795579 ~ 23796178 (+)
G2263926 NA other upstream 171668 23525340 ~ 23526020 (+)
G2262601 NA other upstream 1423981 22269718 ~ 22273707 (+)
G2261587 NA other upstream 1688940 22008112 ~ 22008748 (+)
LOC110504779 LOC106612009 other upstream 1744569 21947801 ~ 21953127 (+)
G2261414 fchsd1 other upstream 1925428 21751815 ~ 21772260 (+)
G2264113 LOC100136700 other downstream 144523 23855609 ~ 23863973 (+)
G2264210 LOC106582338 other downstream 169695 23880781 ~ 23881032 (+)
G2264344 NA other downstream 478987 24190073 ~ 24190352 (+)
G2264345 NA other downstream 479664 24190750 ~ 24191035 (+)
G2265425 LOC106611874 other downstream 1504565 25215651 ~ 25244329 (+)

Expression


Co-expression Network