Gene
RNA
| Item | Value |
|---|---|
| gene id | G2265454 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 25420334 ~ 25421319 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hepatocyte cell adhesion molecule-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2591293 | True | 689 | lncRNA | 0.40 | 2 | 25420334 | 25421319 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504297 | LOC106611877 | coding | upstream | 111692 | 25304278 ~ 25308642 (+) |
| hmgxb3 | hmgxb3 | coding | upstream | 204954 | 25202079 ~ 25215380 (+) |
| LOC100136157 | LOC100136157 | coding | upstream | 228856 | 25183222 ~ 25191478 (+) |
| LOC110504826 | LOC106611870 | coding | upstream | 238926 | 25091632 ~ 25181408 (+) |
| LOC110504823 | LOC106604841 | coding | upstream | 340108 | 25065488 ~ 25080226 (+) |
| LOC110504832 | LOC106611862 | coding | downstream | 96614 | 25517933 ~ 25536990 (+) |
| LOC118946013 | NA | coding | downstream | 119657 | 25540976 ~ 25551549 (+) |
| LOC110504839 | LOC106611885 | coding | downstream | 130258 | 25551577 ~ 25576248 (+) |
| si:dkey-74k8.4 | aldob | coding | downstream | 157890 | 25557578 ~ 25586728 (+) |
| LOC110504411 | LOC106611888 | coding | downstream | 167032 | 25588351 ~ 25607112 (+) |
| G2265460 | NA | non-coding | upstream | 18337 | 25354526 ~ 25401997 (+) |
| G2265513 | NA | non-coding | upstream | 51514 | 25362932 ~ 25368820 (+) |
| G2265452 | LOC106611878 | non-coding | upstream | 98723 | 25320864 ~ 25321611 (+) |
| G2265453 | LOC106611878 | non-coding | upstream | 106255 | 25311128 ~ 25314079 (+) |
| G2265491 | NA | non-coding | upstream | 109601 | 25310453 ~ 25310733 (+) |
| LOC110504413 | LOC106611901 | non-coding | downstream | 395590 | 25756889 ~ 25820010 (+) |
| G2265698 | NA | non-coding | downstream | 403052 | 25824371 ~ 25824729 (+) |
| G2265700 | NA | non-coding | downstream | 414602 | 25835921 ~ 25836374 (+) |
| G2265731 | NA | non-coding | downstream | 530333 | 25951652 ~ 25951961 (+) |
| G2265425 | LOC106611874 | other | upstream | 176005 | 25215651 ~ 25244329 (+) |
| G2264345 | NA | other | upstream | 1229299 | 24190750 ~ 24191035 (+) |
| G2264344 | NA | other | upstream | 1229982 | 24190073 ~ 24190352 (+) |
| G2264210 | LOC106582338 | other | upstream | 1539302 | 23880781 ~ 23881032 (+) |
| G2264113 | LOC100136700 | other | upstream | 1556361 | 23855609 ~ 23863973 (+) |
| G2265625 | NA | other | downstream | 203826 | 25625145 ~ 25626856 (+) |
| LOC110504852 | LOC106611898 | other | downstream | 402721 | 25820435 ~ 25838497 (+) |
| G2265744 | NA | other | downstream | 556816 | 25978135 ~ 25978638 (+) |
| LOC118946064 | NA | other | downstream | 868406 | 26289725 ~ 26292004 (+) |
