G2266577


Basic Information

Item Value
gene id G2266577
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 26387319 ~ 26387861 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2592733
CTGGTTAATACTGCCTGGTACTTACAGTCTGTCttcatggttctgttagtctctCCTGGGACTATAGCTGGTTAATACTGCCTGGTACTTACAGTCTGTCttcatggttctgttagtctctCCTGGGACTATAGCTGGTTAATACTGCCTGGTACTTACAGTCTGTCttcatggttctgttagtctctCCTGGGACTATAGCTGGTTAATACTGCCTGGTACTTACAGTCTGTCttcatggttctgttagtctctCCTGGGACTATAGCTGGTTAATACTGCATGGTACCTAGAGCAGCACCAACCTCTACAGTACATCTCAGGAGAAAGCAGCAAAGCTTGCTAATTTCCCCCTCGatacacctctccctctcctacccacttcttcatccctctcctacccacttcttcatccctctcctacccacttcttcatccctctcctacccacttcttcatccctctcctacccacttcttcatccctctcctacCCACTTCTTCATCCCTCTTCTACCcacttcttcatccctctcctacccac

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2592733 True 543 lncRNA 0.48 1 26387319 26387861

Neighbor

gene id symbol gene type direction distance location
LOC118946064 NA coding upstream 95649 26289725 ~ 26292004 (+)
LOC110504418 LOC106604872 coding upstream 110914 26213009 ~ 26276405 (+)
LOC110504415 dock2 coding upstream 269591 25980922 ~ 26117728 (+)
LOC110504854 LOC106611908 coding upstream 456715 25880623 ~ 25930604 (+)
LOC110504852 LOC106611898 coding upstream 548822 25820435 ~ 25838497 (+)
LOC110504898 LOC106611819 coding downstream 737759 27125620 ~ 27174120 (+)
LOC110504902 k0141 coding downstream 1311828 27699689 ~ 27711246 (+)
LOC110504904 LOC106611814 coding downstream 1323891 27711752 ~ 27774452 (+)
trnap-ugg-72 NA coding downstream 1504540 27892401 ~ 27892472 (+)
LOC110504908 NA coding downstream 1505625 27893486 ~ 27896473 (+)
G2266528 NA non-coding upstream 89144 26297159 ~ 26298175 (+)
G2266467 NA non-coding upstream 161789 26225297 ~ 26225530 (+)
G2266455 NA non-coding upstream 171213 26215866 ~ 26216106 (+)
G2266454 NA non-coding upstream 172334 26214768 ~ 26214985 (+)
G2265820 NA non-coding upstream 230203 26156886 ~ 26157116 (+)
G2266581 NA non-coding downstream 6995 26394856 ~ 26396411 (+)
G2266584 NA non-coding downstream 17852 26405713 ~ 26407998 (+)
G2266585 NA non-coding downstream 18689 26406550 ~ 26409933 (+)
G2266586 NA non-coding downstream 19563 26407424 ~ 26409478 (+)
G2266587 NA non-coding downstream 23570 26411431 ~ 26411999 (+)
LOC110504416 diaph1 other upstream 14836 26298775 ~ 26483992 (+)
G2265744 NA other upstream 408681 25978135 ~ 25978638 (+)
G2265625 NA other upstream 760463 25625145 ~ 25626856 (+)
G2266668 LOC106611853 other downstream 203405 26588592 ~ 26620948 (+)
G2266826 NA other downstream 546859 26934720 ~ 26935889 (+)
G2268340 NA other downstream 2379016 28766877 ~ 28767729 (+)
G2268400 LOC106611722 other downstream 2508894 28896755 ~ 28898079 (+)
G2271027 NA other downstream 4789029 31176890 ~ 31181107 (+)

Expression


Co-expression Network