G2266603


Basic Information

Item Value
gene id G2266603
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 26447372 ~ 26447835 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2592764
gaatcgtctagaatgtaattgtatgctgtagtgttaagatttcccttcactggaactaaggggcccaaaccatgaaaaacagccaaagacctttattcctcctccaccaaacttgtgcattggggcaggtaacattctcctggcatccgccaaacccagattactctgtcggactgccagatggtgaagcatgattcatcactccagagaaagtgtttccactgctccaatggcagcgagctttacaccactccagccaacacttggcattgcgcatggtgatcttaggcttgtgtgcggctgctcggccatggaaacagtTGTTCCGACGAACAGCCTCTGACGTTGctgccagaggcagtttggaacttggtagtgagtgttgcaacggaGGAGcatttttacacgcttcagcactcgccgtTCCAGTTCTTCACAATAACAGTGCTAACAGTTGACCGAGG

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2592764 True 464 lncRNA 0.50 1 26447372 26447835

Neighbor

gene id symbol gene type direction distance location
LOC118946064 NA coding upstream 155702 26289725 ~ 26292004 (+)
LOC110504418 LOC106604872 coding upstream 170967 26213009 ~ 26276405 (+)
LOC110504415 dock2 coding upstream 329644 25980922 ~ 26117728 (+)
LOC110504854 LOC106611908 coding upstream 516768 25880623 ~ 25930604 (+)
LOC110504852 LOC106611898 coding upstream 608875 25820435 ~ 25838497 (+)
LOC110504898 LOC106611819 coding downstream 677785 27125620 ~ 27174120 (+)
LOC110504902 k0141 coding downstream 1251854 27699689 ~ 27711246 (+)
LOC110504904 LOC106611814 coding downstream 1263917 27711752 ~ 27774452 (+)
trnap-ugg-72 NA coding downstream 1444566 27892401 ~ 27892472 (+)
LOC110504908 NA coding downstream 1445651 27893486 ~ 27896473 (+)
G2266602 NA non-coding upstream 2152 26444981 ~ 26445220 (+)
G2266601 NA non-coding upstream 2622 26444510 ~ 26444750 (+)
G2266599 NA non-coding upstream 9864 26437204 ~ 26437508 (+)
G2266587 NA non-coding upstream 35373 26411431 ~ 26411999 (+)
G2266585 NA non-coding upstream 37439 26406550 ~ 26409933 (+)
G2266604 NA non-coding downstream 518 26448353 ~ 26448625 (+)
G2266620 NA non-coding downstream 39144 26486979 ~ 26487504 (+)
G2266668 LOC106611853 non-coding downstream 140757 26588592 ~ 26620948 (+)
G2266667 LOC106604878 non-coding downstream 146910 26594745 ~ 26649298 (+)
G2266675 LOC106611858 non-coding downstream 184940 26632775 ~ 26638107 (+)
LOC110504416 diaph1 other upstream 74889 26298775 ~ 26483992 (+)
G2265744 NA other upstream 468734 25978135 ~ 25978638 (+)
G2265625 NA other upstream 820516 25625145 ~ 25626856 (+)
G2266826 NA other downstream 486885 26934720 ~ 26935889 (+)
G2268340 NA other downstream 2319042 28766877 ~ 28767729 (+)
G2268400 LOC106611722 other downstream 2448920 28896755 ~ 28898079 (+)
G2271027 NA other downstream 4729055 31176890 ~ 31181107 (+)

Expression


Co-expression Network