Gene
RNA
| Item | Value |
|---|---|
| gene id | G2266845 |
| gene name | LOC106611823 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 26974312 ~ 26978980 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protocadherin alpha-3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2593040 | True | 1485 | lncRNA | 0.43 | 2 | 26974312 | 26978980 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504416 | diaph1 | coding | upstream | 490320 | 26298775 ~ 26483992 (+) |
| LOC118946064 | NA | coding | upstream | 682642 | 26289725 ~ 26292004 (+) |
| LOC110504418 | LOC106604872 | coding | upstream | 697907 | 26213009 ~ 26276405 (+) |
| LOC110504415 | dock2 | coding | upstream | 856584 | 25980922 ~ 26117728 (+) |
| LOC110504854 | LOC106611908 | coding | upstream | 1043708 | 25880623 ~ 25930604 (+) |
| LOC110504898 | LOC106611819 | coding | downstream | 146640 | 27125620 ~ 27174120 (+) |
| LOC110504902 | k0141 | coding | downstream | 720709 | 27699689 ~ 27711246 (+) |
| LOC110504904 | LOC106611814 | coding | downstream | 732772 | 27711752 ~ 27774452 (+) |
| trnap-ugg-72 | NA | coding | downstream | 913421 | 27892401 ~ 27892472 (+) |
| LOC110504908 | NA | coding | downstream | 914506 | 27893486 ~ 27896473 (+) |
| G2266813 | NA | non-coding | upstream | 55516 | 26915156 ~ 26918796 (+) |
| G2266789 | LOC106611688 | non-coding | upstream | 94677 | 26873871 ~ 26879635 (+) |
| G2266786 | LOC106611845 | non-coding | upstream | 98005 | 26863343 ~ 26876307 (+) |
| G2266784 | LOC106611685 | non-coding | upstream | 101550 | 26858211 ~ 26872762 (+) |
| G2266729 | NA | non-coding | upstream | 233523 | 26735808 ~ 26740789 (+) |
| G2266848 | LOC106611822 | non-coding | downstream | 9489 | 26988469 ~ 26989173 (+) |
| G2266850 | NA | non-coding | downstream | 13460 | 26992440 ~ 26992741 (+) |
| G2267173 | NA | non-coding | downstream | 24457 | 27003437 ~ 27003676 (+) |
| G2267236 | NA | non-coding | downstream | 100068 | 27079048 ~ 27079268 (+) |
| G2267249 | NA | non-coding | downstream | 109354 | 27088334 ~ 27088549 (+) |
| G2266826 | NA | other | upstream | 38423 | 26934720 ~ 26935889 (+) |
| G2266668 | LOC106611853 | other | upstream | 353364 | 26588592 ~ 26620948 (+) |
| G2265744 | NA | other | upstream | 995674 | 25978135 ~ 25978638 (+) |
| G2268340 | NA | other | downstream | 1787897 | 28766877 ~ 28767729 (+) |
| G2268400 | LOC106611722 | other | downstream | 1917775 | 28896755 ~ 28898079 (+) |
| G2271027 | NA | other | downstream | 4197910 | 31176890 ~ 31181107 (+) |
| G2272912 | LOC106611792 | other | downstream | 5884456 | 32863436 ~ 32866226 (+) |
| LOC110505056 | LOC105028844 | other | downstream | 6437110 | 33328263 ~ 33421963 (+) |
