G2267264 (LOC107579696)


Basic Information

Item Value
gene id G2267264
gene name LOC107579696
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 27109551 ~ 27109990 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2593574
cttaatgccttcagcggaaataacagaaccgagaaatgtgacggaggaggcatgaaaagtgcacttctcagccttcacaaaaagacaattctctaaaaggcgctggaggacacgtcgaacgtgctgaagatgaatctggagtgacggtgaaaaaatcaggatatcgtcaaggtaaacgaaaacaaagatgttcagcatgtctctcaggacatcattgactaatgcctgaaaaacagctggagcgttagcgaggccgaaaggaagaacccggtattcaaagtgccctaacggagtgttaaacgccgtcttccactcgtccccctccctgatgcgcacgagatggtaagcgttacgaaggtccaacttagtgaaaaacctggctccctgcaggatctcgaaggctgaagacataagaggaagcggataacgattcttaactg

Function

NR:

description
PREDICTED: uncharacterized protein LOC109045530

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2593574 True 440 lncRNA 0.48 1 27109551 27109990

Neighbor

gene id symbol gene type direction distance location
LOC110504416 diaph1 coding upstream 625559 26298775 ~ 26483992 (+)
LOC118946064 NA coding upstream 817881 26289725 ~ 26292004 (+)
LOC110504418 LOC106604872 coding upstream 833146 26213009 ~ 26276405 (+)
LOC110504415 dock2 coding upstream 991823 25980922 ~ 26117728 (+)
LOC110504854 LOC106611908 coding upstream 1178947 25880623 ~ 25930604 (+)
LOC110504898 LOC106611819 coding downstream 15630 27125620 ~ 27174120 (+)
LOC110504902 k0141 coding downstream 589699 27699689 ~ 27711246 (+)
LOC110504904 LOC106611814 coding downstream 601762 27711752 ~ 27774452 (+)
trnap-ugg-72 NA coding downstream 782411 27892401 ~ 27892472 (+)
LOC110504908 NA coding downstream 783496 27893486 ~ 27896473 (+)
G2267249 NA non-coding upstream 21002 27088334 ~ 27088549 (+)
G2267236 NA non-coding upstream 30283 27079048 ~ 27079268 (+)
G2267173 NA non-coding upstream 105875 27003437 ~ 27003676 (+)
G2266850 NA non-coding upstream 116810 26992440 ~ 26992741 (+)
G2266848 LOC106611822 non-coding upstream 120378 26988469 ~ 26989173 (+)
G2267296 NA non-coding downstream 73791 27183781 ~ 27186357 (+)
G2267258 LOC106611818 non-coding downstream 83587 27193577 ~ 27193904 (+)
G2267305 NA non-coding downstream 94315 27204305 ~ 27281986 (+)
G2267334 NA non-coding downstream 156342 27266332 ~ 27266757 (+)
G2267352 NA non-coding downstream 177641 27287631 ~ 27287872 (+)
G2266826 NA other upstream 173662 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 488603 26588592 ~ 26620948 (+)
G2265744 NA other upstream 1130913 25978135 ~ 25978638 (+)
G2268340 NA other downstream 1656887 28766877 ~ 28767729 (+)
G2268400 LOC106611722 other downstream 1786765 28896755 ~ 28898079 (+)
G2271027 NA other downstream 4066900 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 5753446 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 6306100 33328263 ~ 33421963 (+)

Expression


Co-expression Network