G2267437


Basic Information

Item Value
gene id G2267437
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 27481515 ~ 27503158 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2593804
agtagggtacggtatggagggatgagagaggagagagaacctgagataacagtagggtacggtatggagagaagagagagaaagagagcagaggacccTGGTTCTGCTATAGAAGAGCTTTAACGATATGATGGAGTGAGACGAAGGGAGAAAGGGAtagatagagatggagacagtAAGAGACATGGACAGAGTGGAAGACATGATAAGCAGACAGAGAAACTGACACAGAcagcgggagagaaagagaatgacatTTTTAATGTTGCAAAATGGTTGGTTTTATGGAAGTGACTCTGGGAGACTGGAGGGGTGGttaagggagggagtgagagagagatagacggaCAACGGTTAAGTGACGAGGGAgatgagcaagagagagatggggacaaagaaagagggagagatggggagagagagcgagaacctAAGATGACAGGAGGGTACAGtacggagggatgagagaggagagagaacctgagataacagtagggtacagtacggagggatgagagaagagagagaacctgagatgacagtagggtacagtacggagggatgagagtagagagagaacctgagatgacagtagggtacagtacggAGGGATGAGATTagagagagaacctgagatgaCATTAGTGTACAGTACGGAGggatgagaaaggagagagaacctgagatgacagtagggtatggtatggagggatgagagatgagagagaacctgagatgaCAGGAGGGTACGGTATGGAGGtatgagaaaggagagagaacctgagatgacagtagggtacggtatggagggatgagagaagagagagaacctgagatgacagtagggtacggtatagagggatgagagaagagagagaacctgagatgacagtagggtacagtacagagggatgagagaggacagagaaccTGAGATGACAGTAGGGTACGGTATAGAggtatgagagaggagagagaacctgagataaCAGTAGGATAtggtatggagggatgagagaggagagagaaccagagataacagtagggtacggtatggagagatgagagaagagagagaacctgagatgaGAGTAGTGTAcggtatggagggatgagagaggagagagaacctgagatgaGAGTAGTGTAcggtatggagggaggagagaagagagagaacctgagatgacagtagggtacggtatggagggatgagagaagagagacaacCTGAGATAACAATAGGGTAcagtatggagagatgagagaagagagagaacctgagatgacagtagggtacggtatggagagatgagagaagagagagaacctgagataacagtagggtacggtatggagggatgagagaagagagagaacctgagataacagtagggtacggtatggagagatgagagagaacctgagataacagtagggtacggtatggagagatgagagaggagagacagagggagtgtgTAACTGACATCTCTTTACCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2593804 True 1503 lncRNA 0.48 4 27481515 27503158

Neighbor

gene id symbol gene type direction distance location
LOC110504898 LOC106611819 coding upstream 307395 27125620 ~ 27174120 (+)
LOC110504416 diaph1 coding upstream 997523 26298775 ~ 26483992 (+)
LOC118946064 NA coding upstream 1189845 26289725 ~ 26292004 (+)
LOC110504418 LOC106604872 coding upstream 1205110 26213009 ~ 26276405 (+)
LOC110504415 dock2 coding upstream 1363787 25980922 ~ 26117728 (+)
LOC110504902 k0141 coding downstream 196531 27699689 ~ 27711246 (+)
LOC110504904 LOC106611814 coding downstream 208594 27711752 ~ 27774452 (+)
trnap-ugg-72 NA coding downstream 389243 27892401 ~ 27892472 (+)
LOC110504908 NA coding downstream 390328 27893486 ~ 27896473 (+)
LOC110504909 LOC106611695 coding downstream 399539 27902697 ~ 27908430 (+)
G2267360 NA non-coding upstream 175274 27305810 ~ 27306241 (+)
G2267352 NA non-coding upstream 193643 27287631 ~ 27287872 (+)
G2267305 NA non-coding upstream 199529 27204305 ~ 27281986 (+)
G2267334 NA non-coding upstream 214758 27266332 ~ 27266757 (+)
G2267258 LOC106611818 non-coding upstream 287611 27193577 ~ 27193904 (+)
G2267461 NA non-coding downstream 55720 27558878 ~ 27571059 (+)
G2267479 NA non-coding downstream 114099 27617257 ~ 27617568 (+)
G2267845 NA non-coding downstream 198950 27702108 ~ 27702628 (+)
G2267868 NA non-coding downstream 277767 27780925 ~ 27781157 (+)
G2266826 NA other upstream 545626 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 860567 26588592 ~ 26620948 (+)
G2265744 NA other upstream 1502877 25978135 ~ 25978638 (+)
G2268340 NA other downstream 1263719 28766877 ~ 28767729 (+)
G2268400 LOC106611722 other downstream 1393597 28896755 ~ 28898079 (+)
G2271027 NA other downstream 3673732 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 5360278 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 5912932 33328263 ~ 33421963 (+)

Expression


Co-expression Network