G2267935 (ints10)


Basic Information

Item Value
gene id G2267935
gene name ints10
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 27899471 ~ 27899830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2594422
CCCAGGCTGTCGTGGGACTGGAGGAGATCCCAGCTCTCCCTGGCCAAACGGAAGCTCTCCAGAGTCTCTGCCCACCCGGGCATCTCTATTTTGTTGACCATGATGTTCCGGCCACGCCCCTTCCCCAGGCCCTCGTCATCATCTGAGCTCATGGTCTTCTCGCGGCCGTCGGCCAGTTTGCGTTTCTTGTGAGCGTGtttccctgctcctctctccagttcTACTTCACTGTACACTGAGCTCAGGTCCTCCAACAGTATCCACGACCCAGAGGCCAACGCA

Function

symbol description
ints10 Predicted to be involved in snRNA processing. Predicted to be located in nucleus. Predicted to be part of integrator complex. Orthologous to human INTS10 (integrator complex subunit 10).

NR:

description
integrator complex subunit 10 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2594422 True 282 lncRNA 0.59 2 27899471 27899830

Neighbor

gene id symbol gene type direction distance location
LOC110504908 NA coding upstream 2998 27893486 ~ 27896473 (+)
trnap-ugg-72 NA coding upstream 6999 27892401 ~ 27892472 (+)
LOC110504904 LOC106611814 coding upstream 125019 27711752 ~ 27774452 (+)
LOC110504902 k0141 coding upstream 188225 27699689 ~ 27711246 (+)
LOC110504898 LOC106611819 coding upstream 725351 27125620 ~ 27174120 (+)
LOC110504909 LOC106611695 coding downstream 2867 27902697 ~ 27908430 (+)
LOC110504911 NA coding downstream 53282 27953112 ~ 27954152 (+)
LOC110504912 LOC106611698 coding downstream 58908 27958738 ~ 27961819 (+)
LOC110504914 LOC106611700 coding downstream 88122 27987952 ~ 28010322 (+)
LOC118946038 NA coding downstream 154558 28054388 ~ 28056425 (+)
G2267883 NA non-coding upstream 73844 27818248 ~ 27825627 (+)
G2267872 NA non-coding upstream 104025 27793509 ~ 27795446 (+)
G2267870 NA non-coding upstream 106801 27786214 ~ 27792670 (+)
G2267868 NA non-coding upstream 118314 27780925 ~ 27781157 (+)
G2267943 NA non-coding downstream 17385 27917215 ~ 27923755 (+)
G2267946 NA non-coding downstream 27695 27927525 ~ 27928014 (+)
G2267955 NA non-coding downstream 54780 27954610 ~ 27954885 (+)
G2266826 NA other upstream 963582 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 1278523 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 1526988 26298775 ~ 26483992 (+)
LOC118946064 NA other upstream 1607467 26289725 ~ 26292004 (+)
G2265744 NA other upstream 1920833 25978135 ~ 25978638 (+)
G2268340 NA other downstream 867047 28766877 ~ 28767729 (+)
G2268400 LOC106611722 other downstream 996925 28896755 ~ 28898079 (+)
G2271027 NA other downstream 3277060 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 4963606 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 5516260 33328263 ~ 33421963 (+)

Expression


Co-expression Network