G2267943


Basic Information

Item Value
gene id G2267943
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 27917215 ~ 27923755 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2594431
TCTTTAATGTTAACACAAATGTAACAGAGAATGATATGTGGGAGAACAGGGAAGTAGTGGTTATGTTTGCATAGCCATAAACCAAGGAAGGACAGATAGACTCAAACTAACACAAACATAGATGTATATCTATCTACAGGTCTGGTACAAACCGAATCAGTCAGTCCGCCCGTCTGCAGAGCTAAACATGGGCAAGtagtaaaatagtaaaaattgTGGCTCAGTGTTAAATGCCTTTGGATCGATGCTATGTTTTAACAGTCAGCCTTTCTTGTGCCGTGTCAAAACCTTTTTACAAAATACCAAATGAATATCCTTTCCACTATTCCCCCATCCACGCAATGCACCCCAGAAAAATATATGTATCCTTTGGATTCAAAGTTGATATACTGTATAATTACTGCATATAAGCGTTTGGGTTATTGAGTGTTTTCTCCATTCAAGCATTCGCACACAAGTAGTCAGTCAGGAGCCAGGAATGGAACAGAAATAGATAGCTTTAACATGGTTCATTTCTCTTCTTAAAGGTGcaatctgtttttttattttacggCTAATAGTGCTCCCCTTTCATTTGATTGTAAACGGAAGGGGTGGGTCTTCGCGAATGTAAAAGTTTGTGTTTTACTATTTGGCATAACATGCTCGTTGTACTTTTTCCTAGAGTTCCCAATAGAAACATCTAAGTTACAGATTGCACCTTTAACTGGATCCGAAGAATCATTGAAGCAGCTAAAGCAGACACCAGCCCAGAGGAGGAAGAATCATTGAAGCAGCTAAAGCAGACACCAGCCCAGAGGAGGAAGAATCATTGAAGCAGCTAAAGCAGACACCAGCCCAGAGGAGGAACAgaaggtggagggaggtagaAGAAACTACAACATCAATAAGGTCTTACACCAGCAAGGACCATGGCGCAAACAGTCATAGAAATGAATACATACATAAATACGTACATACATaattcatacatacagtatacaataaGAAGATAGATAGTTAGTTATAAAATACCTATGTACAAATGCATAGTCCAGATGAGTCCATCAGGAGACCTAGCAGTAATGGCAGTCAGTGGAAGAGGTTATTTTCATCATTtaaggatgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgatctgtgtgTATGTTAATCATAGACAGTGTGTATGGTACCTTGATGTCGTGCAGGGAGATGCGTAGCAGGCTGACTCTGTCTGACTCAGAGAGCAGCTCCACTCTACTGATGCTGCTGAAGTCGACCAGGGTGGACACCATGTTGAGCTTGTGGTTGACCACCTGACTCAGGCCATAGCGCGCCCCCACCAACAGACTGACCAGCGCCTCCCGATCCTGCAACTGGGGTGGGGGAGGatgtagacagacagaggggCAGGGGTACAGAGGTCCGAAGAGGAAGGGGGACGGGAGagacatgagggaagagagagagggagtgggaaagaggaaaagaggtagagagagagagaagaggggtgaaAGGGAGAAATACGGAGGTGCATA

Function

NR:

description
PREDICTED: FERM and PDZ domain-containing protein 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2594431 True 1537 lncRNA 0.44 2 27917215 27923755

Neighbor

gene id symbol gene type direction distance location
LOC110504909 LOC106611695 coding upstream 8785 27902697 ~ 27908430 (+)
LOC110504908 NA coding upstream 20742 27893486 ~ 27896473 (+)
trnap-ugg-72 NA coding upstream 24743 27892401 ~ 27892472 (+)
LOC110504904 LOC106611814 coding upstream 142763 27711752 ~ 27774452 (+)
LOC110504902 k0141 coding upstream 205969 27699689 ~ 27711246 (+)
LOC110504911 NA coding downstream 29357 27953112 ~ 27954152 (+)
LOC110504912 LOC106611698 coding downstream 34983 27958738 ~ 27961819 (+)
LOC110504914 LOC106611700 coding downstream 64197 27987952 ~ 28010322 (+)
LOC118946038 NA coding downstream 130633 28054388 ~ 28056425 (+)
LOC110504919 LOC106611705 coding downstream 133657 28057412 ~ 28065727 (+)
G2267935 ints10 non-coding upstream 17385 27899471 ~ 27899830 (+)
G2267883 NA non-coding upstream 91588 27818248 ~ 27825627 (+)
G2267872 NA non-coding upstream 121769 27793509 ~ 27795446 (+)
G2267870 NA non-coding upstream 124545 27786214 ~ 27792670 (+)
G2267946 NA non-coding downstream 3770 27927525 ~ 27928014 (+)
G2267955 NA non-coding downstream 30855 27954610 ~ 27954885 (+)
G2267962 NA non-coding downstream 32295 27956050 ~ 27956434 (+)
G2267924 NA non-coding downstream 38147 27961902 ~ 27963378 (+)
G2266826 NA other upstream 981326 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 1296267 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 1544732 26298775 ~ 26483992 (+)
LOC118946064 NA other upstream 1625211 26289725 ~ 26292004 (+)
G2265744 NA other upstream 1938577 25978135 ~ 25978638 (+)
G2268340 NA other downstream 843122 28766877 ~ 28767729 (+)
G2268400 LOC106611722 other downstream 973000 28896755 ~ 28898079 (+)
G2271027 NA other downstream 3253135 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 4939681 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 5492335 33328263 ~ 33421963 (+)

Expression


Co-expression Network