G2267924


Basic Information

Item Value
gene id G2267924
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 27961902 ~ 27963378 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2594409
CAACATTTCTACTTTATTCAACAAAGCCAGAATGACAGACCATgttagagggagggagtgatCAGCTGGTTTGAAACGAACAATGATTACAGGCGAGGTGTTTTACCATAGATGAATTAGAGATAGTGTTTCTTAGAATTATGCACAAATAGACAATGGCGATCCATATCTCAATATGTTAACACAAAACTGTCATGAGAACAATAGAAAACATTACAACTACTGTTTTACACAATTCGATCAAGTGTTTCATAAGAACAAGAAGGCCAGTAATGAATTGTGTGCAGAGACATTGTAGTGCTTTTCTACGTCCTTAAAAGGAAGTCATGGCTGACCCTTAGGAGTACTGTTAAGTGTACTGAGGCATGTTCTCAAAACGCTAATACTATACACTTCCTCTTTCAAGTAACATTTTAGAAGTTAGTTATTTCTTGTAAAACAGTAAGAGCAAGAGGCAGAAGTTTACCTTCATGTTGGGAGAGCATGTTAAAGGAAacattcacccattttgaatgttataccGTTTTTGTGCATCTATTTGCCATTCAAGCAGGCATAAATACAGCTGAAAGGGCAAATTTTACGTCATACCCGCTGTATTTCTATGACGCTAAAGACgtcataccggctgtatttctaTGACGCTAAAGACGTCATACCCGCTGTATTtaTGACACTAAAGACgtcatacgtatttctaTGACACTAAAGACGTCATACGTATTTCTATGACACTAAAGACGTTGTATTTCTATGATGCAAAACATGGCATACTGGCTGTATTTCTGCATGTTTGAACAGCGAatagctcagatacacatgaaaatccccaggaatcgatagaacatcgctcagagatgcacaaaaatGATATAACATTCTAAATGGGTGAATCTTTCCTTTAATAGAACAGCAATAATCTTAACACAGATTCCTTCCTGGTCACTTACGGCTTTTACCTTCCCTGGTAATGACTACTGATTGGTTGATAAAAAAATCATTCTAACAGGAGGACCGAGGCAGAATTGAGAAGTTGTAGAGCAGCATTAGAATTTGAGTTCGCTGGGCATGTCTGTGCCCTGTAGGCCTGCCAGCAGATTGTTTGCGGACAGCTCTGCCATGATGCCACGTGTGGAGTAGGTAGCACTGCCAATGTGGGGCAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2594409 True 1164 lncRNA 0.39 3 27961902 27963378

Neighbor

gene id symbol gene type direction distance location
LOC110504912 LOC106611698 coding upstream 83 27958738 ~ 27961819 (+)
LOC110504911 NA coding upstream 7754 27953112 ~ 27954152 (+)
LOC110504909 LOC106611695 coding upstream 53472 27902697 ~ 27908430 (+)
LOC110504908 NA coding upstream 65429 27893486 ~ 27896473 (+)
trnap-ugg-72 NA coding upstream 69430 27892401 ~ 27892472 (+)
LOC110504914 LOC106611700 coding downstream 24574 27987952 ~ 28010322 (+)
LOC118946038 NA coding downstream 91010 28054388 ~ 28056425 (+)
LOC110504919 LOC106611705 coding downstream 94034 28057412 ~ 28065727 (+)
trmt12 LOC106611794 coding downstream 192043 28155421 ~ 28163913 (+)
sytl4 LOC106611707 coding downstream 207083 28170461 ~ 28188340 (+)
G2267962 NA non-coding upstream 5468 27956050 ~ 27956434 (+)
G2267955 NA non-coding upstream 7017 27954610 ~ 27954885 (+)
G2267946 NA non-coding upstream 33888 27927525 ~ 27928014 (+)
G2267943 NA non-coding upstream 38147 27917215 ~ 27923755 (+)
G2267925 NA non-coding downstream 50748 28014126 ~ 28014875 (+)
G2267930 NA non-coding downstream 57682 28021060 ~ 28021789 (+)
G2267978 NA non-coding downstream 61589 28024967 ~ 28025187 (+)
G2267923 NA non-coding downstream 66327 28029705 ~ 28030911 (+)
G2266826 NA other upstream 1026013 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 1340954 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 1589419 26298775 ~ 26483992 (+)
LOC118946064 NA other upstream 1669898 26289725 ~ 26292004 (+)
G2265744 NA other upstream 1983264 25978135 ~ 25978638 (+)
G2268340 NA other downstream 803499 28766877 ~ 28767729 (+)
G2268400 LOC106611722 other downstream 933377 28896755 ~ 28898079 (+)
G2271027 NA other downstream 3213512 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 4900058 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 5452712 33328263 ~ 33421963 (+)

Expression


Co-expression Network