G2267923


Basic Information

Item Value
gene id G2267923
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 28029705 ~ 28030911 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2594408
ccactttgacattattgggtattgtgtcgGCCAATGACAAAAACAatataaatgtaatccattttaaattcggGCTGTAATaactaaaatgtagaaaaagtcaaggggtgtgaataatttccaaatgcactgtaaagaGCACACTGAACCTTTGTGATCAAAGTCACATTGGTGCCTCTGACAGGCTGAATCGACAACTGGAGGCATATACAATACATTCCATTGATCAAGCAAATAGCTGGCTGTTTTTACATAAAACACTTCATTTATTGAGGTGTAAAAAGTGTGGAAGATAATTCAAGGGATTAAGTAGCCAGTAGACCTGACCTGCTTGTTTACAGCTGTACTAGGGTCAGACAGCATTTCTGTGTTGTTTAAGACACTGCGGAGCAGGTGCCAGATATGGCTTGGAAAACATCTCAATCCAGGGATGAGAAATGCATTGTACTCTGAATTGTCCCATTATCCCGACTGCTACTTCTTCCGGAAAACTGTCCTTTCCGTCCTCATGCTAGGTAGCAGAAGTTACAGCAGTGTTCAATCTCTGTGGTGTCTTAATTTACACAAGAATGCTGTCCAACCCTGTAAGCAAGCTGGTCAGATCGCCTGGCTAAGAATGAACACAATACACAGAATTGGCATATACAATGTGACAGAGCTTAgttaaaacaaaaatacaatttcaacAGAAGATTACTGTTGGTCTAACCAGCAAAGGAGAACAGAGATTTGGGGAGTTATTTACGGAGAATAAATGAAGGGGAAACCTAAATACTTCAGCACCTGTTCCTCCACCCACCCTGGGATCCTAAATAACTATagaacaaatgtttttttaaatgctaAGACCATCAACTGCTGGTAAATGTGACTGCCTAGGCCAGTCAACCCACTACATTCGGATCACTGGTCCATATTTCTCAAACCCCAAACCCGACTGCAGCCGAGTCAAATTTGTCACACAGGACCTTATCCCCTCTTCCACTTCCTCTATCTGTTTGTCTGTACTAATTTACAGGCTGTAGAACTTAAGGCTCCTGTCCATTCCCGCGGAGGAAAGGAACTGAGCATTGTCTCCAAACGCCACGCCGGTCACAAGGCCAGAG

Function

NR:

description
pre-mRNA-processing factor 19

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2594408 True 1106 lncRNA 0.42 2 28029705 28030911

Neighbor

gene id symbol gene type direction distance location
LOC110504914 LOC106611700 coding upstream 19383 27987952 ~ 28010322 (+)
LOC110504912 LOC106611698 coding upstream 67886 27958738 ~ 27961819 (+)
LOC110504911 NA coding upstream 75557 27953112 ~ 27954152 (+)
LOC110504909 LOC106611695 coding upstream 121275 27902697 ~ 27908430 (+)
LOC110504908 NA coding upstream 133232 27893486 ~ 27896473 (+)
LOC118946038 NA coding downstream 23477 28054388 ~ 28056425 (+)
LOC110504919 LOC106611705 coding downstream 26501 28057412 ~ 28065727 (+)
trmt12 LOC106611794 coding downstream 124510 28155421 ~ 28163913 (+)
sytl4 LOC106611707 coding downstream 139550 28170461 ~ 28188340 (+)
LOC110504926 tsn7 coding downstream 167762 28198673 ~ 28209723 (+)
G2267978 NA non-coding upstream 4518 28024967 ~ 28025187 (+)
G2267930 NA non-coding upstream 7916 28021060 ~ 28021789 (+)
G2267925 NA non-coding upstream 14830 28014126 ~ 28014875 (+)
G2267924 NA non-coding upstream 66327 27961902 ~ 27963378 (+)
G2267994 NA non-coding downstream 37714 28068625 ~ 28070758 (+)
G2267999 LOC106611703 non-coding downstream 42615 28073526 ~ 28078028 (+)
G2268035 LOC106611706 non-coding downstream 95830 28126741 ~ 28127553 (+)
G2268036 NA non-coding downstream 104630 28135541 ~ 28135887 (+)
G2268037 NA non-coding downstream 105249 28136160 ~ 28136441 (+)
G2266826 NA other upstream 1093816 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 1408757 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 1657222 26298775 ~ 26483992 (+)
LOC118946064 NA other upstream 1737701 26289725 ~ 26292004 (+)
G2265744 NA other upstream 2051067 25978135 ~ 25978638 (+)
G2268340 NA other downstream 735966 28766877 ~ 28767729 (+)
G2268400 LOC106611722 other downstream 865844 28896755 ~ 28898079 (+)
G2271027 NA other downstream 3145979 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 4832525 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 5385179 33328263 ~ 33421963 (+)

Expression


Co-expression Network