G2267994


Basic Information

Item Value
gene id G2267994
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 28068625 ~ 28070758 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2594486
ggtttggccggggtaggccgtcattgtaagtaagaatttgttcttaactgacgtgcgtaattaaataaaaggttaaataaatacaaaagatTTTTCAAAgatttggacaccgaggaacttgaagctctcgaccggCTCAACTGCAGCcttgtcgatgtggatgggggggtgctcacagcgtggcagaggtgatgttgcctaccctcaccacccacAAGGGTGGTGGTttaaaatgctagtaaaactaagtgcatggtcttcaaccgattgctgtccGCACcctcccgactagcatcactactctggacggttctgacttagaatatgtggacaattacaaatacctaggtgtccggttagactgtaaactctccttccagactcacattaagcatcgccaattcaaaattaaatctagaatcggcttcctatttcgcaacaaagcatccttcactcacgctgccaaacataccctcgtaaaacggactatcctaccgatcctcgacgatgtcatttacaaaataacctccaacactctactcagcaaactggatgtagcctatcacagtgccatccgctttgtcaccaaagccccatttactacccaccactgcaacctgtatgctctcgttggctggccctcactacatatttgtcgccaaacccactggctccaggtcatctataagtctctgctaggtaaagccccgtcttatctcagctcactggtcaccattgcaacacccacccgtagcacgcgctccagcaggtatatttcactggttatccccaaagccaagtcttcttttggctgcctttccttccagttctctgctgccaatgactggaacgaattgcaaaaatgactgaagctggagtcttatatctcccccTCTaactaagcatcagctgtcagagcagcttaccgatcactgtacctgttcacagcccatctgtaaatagcacacccaactacctcatccccatattattacttaccctcttgctcttttgcaccccagtatctctacttgcacatcatctgcacatccatcactccagtgttaatgctaaattgtaattatttaaatgtattgccttacctctttattcttctacatttgcacacactgtgcatagatttttatattgtgttattgactgtatgtttgtttgtgtgtaactcagtgttattgtttttgtcgcactgctttgctttatcttggccaggtcacagttgtaaatgggaacttgttctcaactggcctacctggttaaataaaggtgaaataaatcaaaataaaagggagtccaggatccagctgcagagAAAGGTGCTCAGTCCCAGGGTTctaagcttggtgatgagcttggatgggactatggtgttgaatgctgaactgtagtgtatgaaAAGCATTtccacataggtattcctcttatttaggtgggtgagggcagtgtggaatggAATTGAGGTCTCCTGAGACATGGGGAATAAAGGCGGGGTCAAGGAGAGGTAGGACATGACcgtgaatatgcctgccagctgcTGGAATAACGTCCGGCCCCGCGACCTTAAGTGTTGAACGGATTAAAGATCACGTCGGCCCCGGAGAGCGAGATCACCTAGTTCCCTGGCTCGGTGGGGGCCCTGACGCACGTCATCATTCAGCAATTGAGTCAAAATTCAATTGAAGTGTTGAAAAAAGTCCCCAAGTTTCCATGAGAACATATTCATTCACTTTCTGTTCTGATTTTAATTTAAGGTGGGAGAAATCTGACCAAGAAAGAGGACAGACTATGAAAGTGAAATTTCAATCTTACAATGGCTGTGTGACTCACAAGCCCTATATTCCCCCCTCATGTCTTTGCTTTAGGTTGGGATAGTGGGTGTGTACCTCGTAGCTGTCCAGCAGCGTGCTTGCGGGGGAGGAGCTGAGTCTGAAGGCACTGTTGAGGATGCCCAGGCCCAGTATGTGTGCCAGCATCTCCCAGCCATCCTCCGGGCACTCCAGAGCCTGGCATAGTGCCCGCTTTGTGTCTGAGCCCAGGCTCTGCATGTCACCTACAGAAATATGACATTGTTGTACTCCACAATGGACAAGAACCAAGATGAGACAGCAGGAGAACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2594486 True 2134 lncRNA 0.47 1 28068625 28070758

Neighbor

gene id symbol gene type direction distance location
LOC110504919 LOC106611705 coding upstream 2898 28057412 ~ 28065727 (+)
LOC118946038 NA coding upstream 12200 28054388 ~ 28056425 (+)
LOC110504914 LOC106611700 coding upstream 58303 27987952 ~ 28010322 (+)
LOC110504912 LOC106611698 coding upstream 106806 27958738 ~ 27961819 (+)
LOC110504911 NA coding upstream 114477 27953112 ~ 27954152 (+)
trmt12 LOC106611794 coding downstream 84663 28155421 ~ 28163913 (+)
sytl4 LOC106611707 coding downstream 99703 28170461 ~ 28188340 (+)
LOC110504926 tsn7 coding downstream 127915 28198673 ~ 28209723 (+)
LOC110504927 NA coding downstream 154679 28225437 ~ 28244563 (+)
LOC110504299 NA coding downstream 185688 28256446 ~ 28307408 (+)
G2267923 NA non-coding upstream 37714 28029705 ~ 28030911 (+)
G2267978 NA non-coding upstream 43438 28024967 ~ 28025187 (+)
G2267930 NA non-coding upstream 46836 28021060 ~ 28021789 (+)
G2267925 NA non-coding upstream 53750 28014126 ~ 28014875 (+)
G2267999 LOC106611703 non-coding downstream 2768 28073526 ~ 28078028 (+)
G2268035 LOC106611706 non-coding downstream 55983 28126741 ~ 28127553 (+)
G2268036 NA non-coding downstream 64783 28135541 ~ 28135887 (+)
G2268037 NA non-coding downstream 65402 28136160 ~ 28136441 (+)
G2268038 NA non-coding downstream 65762 28136520 ~ 28136724 (+)
G2266826 NA other upstream 1132736 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 1447677 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 1696142 26298775 ~ 26483992 (+)
LOC118946064 NA other upstream 1776621 26289725 ~ 26292004 (+)
G2265744 NA other upstream 2089987 25978135 ~ 25978638 (+)
G2268340 NA other downstream 696119 28766877 ~ 28767729 (+)
G2268400 LOC106611722 other downstream 825997 28896755 ~ 28898079 (+)
G2271027 NA other downstream 3106132 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 4792678 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 5345332 33328263 ~ 33421963 (+)

Expression


Co-expression Network