G2268103


Basic Information

Item Value
gene id G2268103
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 28281171 ~ 28285957 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2594613
TTTTGATAGACAGGAGACAGCACATTAGATGTGCAAGGTTCAATGTTGTTGATGGCTGTAAATAGCTTGAATCACTTGCATGGAATTATCAGACTGGGCTTTTgcaatatttgtatttgtattttattagggatccccattagctgctgccaaggcaggggGGTCCAAGCACATTAAGACACTTACATCacacataaaacaaaatataaaacagtacatcatataacactATCACACTAATCTTGCCAATTATTTAAAATtctatctttgtttcatcagacgagaggacatttctccaaaaagtacgatctttttctccatgtgcagttgcaaaccatagtctggctcttttatgccggttttgagcagtggattcttccttgctgagcggcctttcaggttatgtcgatgttggactcgttttactgtggatatagatacttttgtacctgtttcctccagcatcttcacaaggtcctttgatgttgttctgggattgatttgcactttttgcaccaaagtacgttcatctctatgaaacagaacgcgtctccttcctgagcggtataatggctgcgtggtctcatggtgtttatacttgcgtactattgattgtacagatgaacgtggtaccttcaggcgtttggaaattgctcccaagaatgaaccagacttgtggaggtctacaatttttatctgaagtcttggctgatttcttttgactttcccatgatgtcaagaaaagaggcactgagtttgaaggtaggccttgaaatacatccacaggttgcacggtgtttcctctgacgtattggtgcggctggcttccgggttggatgcgtgctgtgttaagaagcaattGACTCAAACAATGTCAattagcttctaaagccataacataattttctgtttaatggcacagtcaactttttattttttatttacattttacccctttttctccccaatttcgtggtatccaattgtttttagtagctactatcttgtctcatcgctacaactcccgtacgggctcgggagaggttgaaagtcatgcgtcctccgatacacaacccaaccaagccgcactgcttcttaacacagaaagcatccaacccggaagccagccgcaccaatatgtcagaggaaacaccgtgcaaccttggttagcgcgcactgcgcccggcccgccacaggagtcgctggtgcgcgatgagacaaggacatccctaccgaccaagccctccctaacccggacgacgctaggccaattgtgcgtcgccccatagacctcccggtcgcagccggttgtgacagagcctgggcacgaacccagagtctctgatggcacagctggcgctgcagtacagcgcccttaaccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2594613 True 1383 lncRNA 0.46 2 28281171 28285957

Neighbor

gene id symbol gene type direction distance location
LOC110504927 NA coding upstream 36608 28225437 ~ 28244563 (+)
LOC110504926 tsn7 coding upstream 71448 28198673 ~ 28209723 (+)
sytl4 LOC106611707 coding upstream 92831 28170461 ~ 28188340 (+)
trmt12 LOC106611794 coding upstream 117258 28155421 ~ 28163913 (+)
LOC110504919 LOC106611705 coding upstream 215444 28057412 ~ 28065727 (+)
m1ip1 m1ip1 coding downstream 16447 28302404 ~ 28304890 (+)
trnav-uac-98 NA coding downstream 67660 28353617 ~ 28353689 (+)
LOC110504931 LOC106611711 coding downstream 72735 28358692 ~ 28370507 (+)
LOC110504300 NA coding downstream 116292 28402249 ~ 28404199 (+)
LOC110504934 LOC106611715 coding downstream 121061 28407018 ~ 28409839 (+)
G2268088 NA non-coding upstream 61223 28219643 ~ 28219948 (+)
G2268078 NA non-coding upstream 66842 28213634 ~ 28214329 (+)
G2268060 NA non-coding upstream 111106 28169738 ~ 28170065 (+)
G2268059 NA non-coding upstream 111659 28169008 ~ 28169512 (+)
G2268058 NA non-coding upstream 112570 28168234 ~ 28168601 (+)
G2268083 NA non-coding downstream 10216 28296173 ~ 28299867 (+)
G2268132 NA non-coding downstream 65240 28351197 ~ 28351400 (+)
G2268133 NA non-coding downstream 65861 28351818 ~ 28352373 (+)
G2268147 NA non-coding downstream 103035 28388992 ~ 28389324 (+)
G2268151 NA non-coding downstream 108441 28394398 ~ 28394676 (+)
G2266826 NA other upstream 1345282 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 1660223 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 1908688 26298775 ~ 26483992 (+)
LOC118946064 NA other upstream 1989167 26289725 ~ 26292004 (+)
G2265744 NA other upstream 2302533 25978135 ~ 25978638 (+)
G2268340 NA other downstream 480920 28766877 ~ 28767729 (+)
G2268400 LOC106611722 other downstream 610798 28896755 ~ 28898079 (+)
G2271027 NA other downstream 2890933 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 4577479 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 5130133 33328263 ~ 33421963 (+)

Expression


Co-expression Network