G2268217


Basic Information

Item Value
gene id G2268217
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 28507365 ~ 28507578 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2594743
gacagggaattttttactaggattaaatgccaggaattgtgaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttctgacttcaactttagatacagagagagggagatagatgctgagggggagagatggagggagagagagggaaagagtcagatacagagagaaagaaacagagagcgagagagaggaacagagagcgagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2594743 True 214 lncRNA 0.43 1 28507365 28507578

Neighbor

gene id symbol gene type direction distance location
LOC110504935 LOC106611716 coding upstream 81706 28410311 ~ 28425659 (+)
LOC110504934 LOC106611715 coding upstream 97526 28407018 ~ 28409839 (+)
LOC110504300 NA coding upstream 103166 28402249 ~ 28404199 (+)
LOC110504931 LOC106611711 coding upstream 136858 28358692 ~ 28370507 (+)
trnav-uac-98 NA coding upstream 153676 28353617 ~ 28353689 (+)
LOC110504936 LOC106611718 coding downstream 196825 28704403 ~ 28722745 (+)
LOC110504939 LOC106611720 coding downstream 220438 28728016 ~ 28748262 (+)
LOC110504941 LOC106611721 coding downstream 311517 28819095 ~ 28834169 (+)
LOC110504942 vgll1 coding downstream 327684 28835262 ~ 28838678 (+)
cd40l cd40l coding downstream 377988 28885566 ~ 28888962 (+)
G2268214 NA non-coding upstream 1744 28505386 ~ 28505621 (+)
G2268211 NA non-coding upstream 8527 28498565 ~ 28498838 (+)
G2268160 NA non-coding upstream 104675 28402405 ~ 28402690 (+)
G2268153 NA non-coding upstream 111133 28395968 ~ 28396232 (+)
G2268152 NA non-coding upstream 112404 28394755 ~ 28394961 (+)
G2268220 NA non-coding downstream 3111 28510689 ~ 28511106 (+)
G2268222 NA non-coding downstream 4824 28512402 ~ 28512607 (+)
G2268234 NA non-coding downstream 35781 28543359 ~ 28543750 (+)
G2268239 NA non-coding downstream 44791 28552369 ~ 28552568 (+)
G2268244 NA non-coding downstream 51526 28559104 ~ 28559315 (+)
G2266826 NA other upstream 1571476 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 1886417 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 2134882 26298775 ~ 26483992 (+)
LOC118946064 NA other upstream 2215361 26289725 ~ 26292004 (+)
G2265744 NA other upstream 2528727 25978135 ~ 25978638 (+)
G2268340 NA other downstream 259299 28766877 ~ 28767729 (+)
G2268400 LOC106611722 other downstream 389177 28896755 ~ 28898079 (+)
G2271027 NA other downstream 2669312 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 4355858 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 4908512 33328263 ~ 33421963 (+)

Expression


Co-expression Network