G2268400 (LOC106611722)



Basic Information


Item Value
gene id G2268400
gene name LOC106611722
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 28896755 ~ 28898079 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2594947
ATGATTccacagagaaaaagagaagggagggggagatgcAGCTAATAGCTGCTTTAACCCTGGGAGCATAGAGCATAGTGGATAATGCTGCACTCTAGCTTTAGAATATTGTGAAATCTCACCACAAATGACCTATTTTCAACCTACGTCATTGTACGCAACGTCTTTTTGTCAACGTTTTCATGGATCTCAGGAATCTGCAAAACGATAACCATTTTTAAGAGGATTATTCTGGCAAAATAAACGGTCAGTGACCGAGCGCGACCTCACCGCACACTGACCACTTCCCGACCCTGTGGAGTAGCAGCTGGTGCAGCCCACCACCAGGTCAACCTGACAGCCAGACAAGCGCCATTCAAAAGACAAGTCTGTACTGGAATGAATGTAGTTACTTATCGCCAACACAACCCCCTCACCTTGTCTATACACTGTGTTTATATAGAACCTGGGACCCCCGTTTGCCTACTCATCTGGTAAGAGCTCTGCCCACACAAACAGCTATATCTGACAGGGTTTTTCCATGGACCCATTACCTCATGTTACCGTAAAAGACTTAAAGCAGTGCTCTTTACCCCAGGCTCCGAATAAACTTAGTGTGTGCATGCTTTTGTCCTAACCCAGCACTATATCCTGATTCAAGTAATCAGCTATTCATCAAGAACCTGAATAGCTCCAGACTCTAGAGGGTtaatgctgggctggaacaaaacccTGCTCACACTGCAGCTCTCGGGTATCAAGACTGAAGAAcaaagagatagagggatattCTGTAGGTCTGGGTTGGCCTACCTCCTTGTAGCCCAGTGCAGCGGAGGGCTTGAGGGGTGGGGCGGGGCGCAGGCAGCTCAGAGACCAGGGCTTGGTGGTCTTGGGGGGCTCCAGGGGTCCCCGGTTGGCCTGGCTGGGGGTGCTGAAGCTGGGAAGGTGAGTGGGGGTGCCCACCATACTGACCGGCTTGATAATGGTGCCCACGGGGCTGGCTCCTTCGCTGTAGGCATGGAGATGGTCCAGCCACTCCTGCAGCTCCTGGGGGTTACTGCAGAACACTGTGATGCGAT

Function


NR:

description
rho guanine nucleotide exchange factor 6-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2594947 True 1061 TUCP 0.51 2 28896755 28898079

Neighbor


gene id symbol gene type direction distance location
cd40l cd40l coding upstream 7793 28885566 ~ 28888962 (+)
LOC110504942 vgll1 coding upstream 58077 28835262 ~ 28838678 (+)
LOC110504941 LOC106611721 coding upstream 62586 28819095 ~ 28834169 (+)
LOC110504939 LOC106611720 coding upstream 148493 28728016 ~ 28748262 (+)
LOC110504936 LOC106611718 coding upstream 174010 28704403 ~ 28722745 (+)
LOC110504943 LOC106611723 coding downstream 30662 28928741 ~ 28947689 (+)
LOC110504946 LOC106611728 coding downstream 165685 29063764 ~ 29068534 (+)
LOC118946044 NA coding downstream 209965 29108044 ~ 29112791 (+)
f9a LOC106611733 coding downstream 598741 29496820 ~ 29501604 (+)
LOC110504958 LOC106611797 coding downstream 919501 29817580 ~ 29825990 (+)
G2268392 NA non-coding upstream 21595 28874878 ~ 28875160 (+)
G2268384 NA non-coding upstream 30342 28866152 ~ 28866413 (+)
G2268382 NA non-coding upstream 33359 28863080 ~ 28863396 (+)
G2268380 NA non-coding upstream 35276 28861267 ~ 28861479 (+)
G2268375 NA non-coding upstream 44700 28848717 ~ 28852055 (+)
G2268419 LOC106611724 non-coding downstream 25567 28923646 ~ 28924561 (+)
G2268426 NA non-coding downstream 45985 28944064 ~ 28944558 (+)
G2268435 NA non-coding downstream 63491 28961570 ~ 28961960 (+)
G2268502 NA non-coding downstream 151069 29049148 ~ 29091292 (+)
G2268532 NA non-coding downstream 204182 29102261 ~ 29106107 (+)
G2268340 NA other upstream 129026 28766877 ~ 28767729 (+)
G2266826 NA other upstream 1960866 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 2275807 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 2524272 26298775 ~ 26483992 (+)
LOC118946064 NA other upstream 2604751 26289725 ~ 26292004 (+)
G2271027 NA other downstream 2278811 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 3965357 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 4518011 33328263 ~ 33421963 (+)
LOC110505080 LOC106611630 other downstream 5304004 34202011 ~ 34207415 (+)
G2274048 NA other downstream 5333916 34231995 ~ 34232604 (+)

Expression



Co-expression Network