G2268538


Basic Information

Item Value
gene id G2268538
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 29121819 ~ 29122187 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2595095
tgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaaggcactgtatttcactggtcatcacCAAAGCCATTCCTCCTTTGGCCGACTttccttccaggtctctgctgccaatgaccggaacaaattgcaaaaatcactgaagctggagactcatatctccctcactaactttacgcatcagctgtcagagcagcttaccgatcattgcacctgcacatagcccatctgtaaatagcccatccaactacctcatccccattatttatttttttgctcctttacaccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2595095 True 348 lncRNA 0.43 2 29121819 29122187

Neighbor

gene id symbol gene type direction distance location
LOC118946044 NA coding upstream 9028 29108044 ~ 29112791 (+)
LOC110504946 LOC106611728 coding upstream 53285 29063764 ~ 29068534 (+)
LOC110504943 LOC106611723 coding upstream 174130 28928741 ~ 28947689 (+)
cd40l cd40l coding upstream 232857 28885566 ~ 28888962 (+)
LOC110504942 vgll1 coding upstream 283141 28835262 ~ 28838678 (+)
f9a LOC106611733 coding downstream 374633 29496820 ~ 29501604 (+)
LOC110504958 LOC106611797 coding downstream 695393 29817580 ~ 29825990 (+)
LOC110504961 LOC106604734 coding downstream 708735 29830922 ~ 29838708 (+)
LOC110504959 LOC106611740 coding downstream 716675 29838862 ~ 29847848 (+)
LOC110504963 LOC106611742 coding downstream 750684 29872871 ~ 29887511 (+)
G2268532 NA non-coding upstream 15712 29102261 ~ 29106107 (+)
G2268502 NA non-coding upstream 30527 29049148 ~ 29091292 (+)
G2268435 NA non-coding upstream 159859 28961570 ~ 28961960 (+)
G2268426 NA non-coding upstream 177261 28944064 ~ 28944558 (+)
G2268419 LOC106611724 non-coding upstream 197258 28923646 ~ 28924561 (+)
G2268598 NA non-coding downstream 99201 29221388 ~ 29223547 (+)
G2268599 NA non-coding downstream 102258 29224445 ~ 29233975 (+)
G2268600 NA non-coding downstream 102633 29224820 ~ 29226187 (+)
G2268604 NA non-coding downstream 116909 29239096 ~ 29239388 (+)
G2268613 NA non-coding downstream 133044 29255231 ~ 29256056 (+)
G2268400 LOC106611722 other upstream 223740 28896755 ~ 28898079 (+)
G2268340 NA other upstream 354090 28766877 ~ 28767729 (+)
G2266826 NA other upstream 2185930 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 2500871 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 2749336 26298775 ~ 26483992 (+)
G2271027 NA other downstream 2054703 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 3741249 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 4293903 33328263 ~ 33421963 (+)
LOC110505080 LOC106611630 other downstream 5079896 34202011 ~ 34207415 (+)
G2274048 NA other downstream 5109808 34231995 ~ 34232604 (+)

Expression


Co-expression Network