Gene
RNA
| Item | Value |
|---|---|
| gene id | G2269919 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 29917813 ~ 29918573 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2596590 | True | 761 | lncRNA | 0.40 | 1 | 29917813 | 29918573 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504963 | LOC106611742 | coding | upstream | 30302 | 29872871 ~ 29887511 (+) |
| LOC110504959 | LOC106611740 | coding | upstream | 69965 | 29838862 ~ 29847848 (+) |
| LOC110504961 | LOC106604734 | coding | upstream | 79105 | 29830922 ~ 29838708 (+) |
| LOC110504958 | LOC106611797 | coding | upstream | 91823 | 29817580 ~ 29825990 (+) |
| f9a | LOC106611733 | coding | upstream | 416209 | 29496820 ~ 29501604 (+) |
| LOC100136647 | LOC106611743 | coding | downstream | 196952 | 30115525 ~ 30205688 (+) |
| cdx1 | cdx1 | coding | downstream | 301357 | 30219930 ~ 30223418 (+) |
| LOC110504968 | LOC106611745 | coding | downstream | 306383 | 30224956 ~ 30230188 (+) |
| LOC110504970 | LOC106611748 | coding | downstream | 353704 | 30272277 ~ 30282447 (+) |
| LOC110504971 | LOC106611749 | coding | downstream | 365126 | 30283699 ~ 30286467 (+) |
| G2269910 | NA | non-coding | upstream | 87226 | 29830285 ~ 29830587 (+) |
| G2269901 | NA | non-coding | upstream | 104393 | 29813183 ~ 29813420 (+) |
| G2269886 | NA | non-coding | upstream | 129014 | 29788597 ~ 29788799 (+) |
| G2269880 | NA | non-coding | upstream | 134257 | 29783338 ~ 29783556 (+) |
| G2269879 | LOC106611739 | non-coding | upstream | 134991 | 29782467 ~ 29782822 (+) |
| G2269958 | NA | non-coding | downstream | 39634 | 29958207 ~ 29958876 (+) |
| G2270001 | NA | non-coding | downstream | 142641 | 30061214 ~ 30062077 (+) |
| G2270010 | NA | non-coding | downstream | 169376 | 30087949 ~ 30088478 (+) |
| G2270258 | NA | non-coding | downstream | 189957 | 30108530 ~ 30108758 (+) |
| G2270307 | NA | non-coding | downstream | 282763 | 30201336 ~ 30202893 (+) |
| G2268400 | LOC106611722 | other | upstream | 1019734 | 28896755 ~ 28898079 (+) |
| G2268340 | NA | other | upstream | 1150084 | 28766877 ~ 28767729 (+) |
| G2266826 | NA | other | upstream | 2981924 | 26934720 ~ 26935889 (+) |
| G2266668 | LOC106611853 | other | upstream | 3296865 | 26588592 ~ 26620948 (+) |
| LOC110504416 | diaph1 | other | upstream | 3545330 | 26298775 ~ 26483992 (+) |
| G2271027 | NA | other | downstream | 1258317 | 31176890 ~ 31181107 (+) |
| G2272912 | LOC106611792 | other | downstream | 2944863 | 32863436 ~ 32866226 (+) |
| LOC110505056 | LOC105028844 | other | downstream | 3497517 | 33328263 ~ 33421963 (+) |
| LOC110505080 | LOC106611630 | other | downstream | 4283510 | 34202011 ~ 34207415 (+) |
| G2274048 | NA | other | downstream | 4313422 | 34231995 ~ 34232604 (+) |
