G2270187


Basic Information

Item Value
gene id G2270187
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 30067626 ~ 30070279 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2596882
tattcagaacctttactcagtactttgttgaagcccctttggcagcgattacagcctcaagtcttcttgggtatgacgcacaagcttggcactcctgtatttggggcgtttttccccattcttctctgcagatcctctcaagctctgtcaggttggatgggaagcgtcactgcacagctatttttaggtctctccagagatgttcgatcgggttcaagtccaggctttggccattcagagacttgtcccgaagccactcctgcgttgtcttggctgtgtgcttagagtcgttgtccagttggaaggtgaaccttcgctccagtctgaggtccagagtgctctggagcaggttatcatcaaggatctctctgtactttgctccgttcatctttccctcgatcctgactagtctcccagtccctactgctgaagagtggcttccatctggccactctaccataaaggtctgattgctggagtgctacatagatggttgtccttctggaaggttctcccatctccacagaggaactctggagctccgtcagagtgaccattgggtccttggtcacctccctgaccaaggcacttctcccacgattgctcagtttggccaggcggctagctctaggaagagtcttggtggttccaaacttcttcaatttaaggccactgtgttcttggggaccttcaatgctgcagaaatgttttggtagccttccccagatctgtgccgcgacacaatcctgtctctgagctctacaaaCAAATCCTTCaaccatggcttggtttttactctgacatgcactgtcaactgtgggaccttatatatacacacacagttttgtgcctttccagatcatgtccaatcaattgaatttcccacaggtggattctaatcaagttgtagaaacatcaaggatgatcaatggaaacaggattcacctgagcttaatttcaagtcgtagcaaagggtctgaatacttaagtaaggcatttctgtttacacaactttctaaaactgtttttgctttgtcattatggggtattgtgtgttgattgagaacatgtatttaatccattttaaaataagactaatgtgaaaaaaagtcaagaagtctgaatactttacgaatgcaatGTAGGTTTTAATCAAACCCCTCTTTAGTGTTATTTTGGGTGGGGGGGGAAAGGGGACAATCCAAAAGCAGGTTAAATTGCCTCTGTTAGGACATCCAATACAAGTATTGTCTCGTTCTACCCGTTTTTAAGGCCACCTTCATGATGGCATATTCAGGACAGTACCATactcCTCTTGGAAGGTAGAGAGTGTAATAGGGTGATCTGCTGCTCAACGTGGGTGAGGGAGCTATGGCTGCCTAAATTGAAATCCAATCAAATCTTAAATTATAACAGGAAAAGGGTCAAAAAGAATACAAAGGGAAGATAGAAATCCACGGAAGTGCGATGCGTTTGTCTATTGCACTCACAAGTTAGACCTCCTGGAAGTCAGGAGACAACGCAGAAAAAgttaacatttaaaataaaaagttccatcttttttttgttgtcaattaTTTATAGCTTCCCTCAAAGTACAGGTAGTAATATAACAATTTATATTTGATGTAAGGCAGTTTGGTGTTTTGCAGAGAGCCCCGTTACACTTCTCTACCCCCATCCTTTACACAGAGCAGCTAAAAACCACAAGCAAAAAAAtcccccctccaaaaaaacaaTCTAACAGCCCTCCAAGTAGACAATTCTAGTGAAGTGTAAAACGTGTAGTTTTTAATATGTAGTAAAATCGCAGTAGGATTTGATGATTTACCTTGTGATTTCATTATATAAATGTAGAGATTCATAACTAATTTCTTCCATTGGTTCTGCCTCCCAAGAGGTCTGTATCAGCTGCAGCACCAACAACTGGCAGCTGATCAAACAGCAAGCTGGTAGATCACCAGTCTGTAGGCTTCTCCACCAATTTCTTCAGTAATTACAAAGAAGAGCAATAACTCCAACAGTACCATCAGCTGGGCTTGATATTATCCAGTCCTTGTAGAAAAAAAACCGAAGTGGTCTTTGCTTCTCATCTTGCGTgtcttttttaaaaatgtgatttgatgaaCATTTACAGTGTTCCAACTTGTATGATTGGTCTGCAACTTCTCCTGAATCCCTAACTCCTCCTCACTCCAGCGTCGTCTGTAAAACATTCTGATCTTCAACTGTCAGTCCCATTTCACAAAGAACGATTCATTTTGCTTTTCCCTTGTTTTGTTTTAAAATGACAAATTCATTTGAAATGGCATTTCCAGTCTTGAATGGATTTGCTGAGAAACTCATGCAGGGGTGTGCACAGTCACAGAAATGGTGATAAGACTAGTTTTCATTTGAGATTAACATAATGATGACACTAAAACTTGATATGACACATATCTGCaaaaaagggggagggaggagctCTTCGGGGGATGGGCGGTGTGTCGGGAGGGGGGGGTCTCTGCGCCGACAGAGGGGTACAGCTGGGGAGCTCAGAGCTTCTCTGAAGAAGGTATCCAGATGTAGGGGCCCGACTGTTCCTCAATGATCATCTTGATTTTGTTGTAGATCTCCTCTAGCGAATCACCC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2596882 True 2631 lncRNA 0.43 2 30067626 30070279

Neighbor

gene id symbol gene type direction distance location
LOC110504962 pdzd11 coding downstream 214191 29848942 ~ 29853435 (-)
LOC110504957 LOC106611739 coding downstream 273438 29762841 ~ 29794188 (-)
LOC110504956 LOC106611738 coding downstream 316139 29747442 ~ 29751487 (-)
LOC110504954 LOC106611736 coding downstream 351769 29714139 ~ 29715857 (-)
LOC110504953 LOC106611735 coding downstream 458403 29536330 ~ 29609223 (-)
LOC110504969 LOC106611747 coding upstream 162788 30233067 ~ 30256177 (-)
LOC110504972 NA coding upstream 199710 30269989 ~ 30279397 (-)
LOC110504974 LOC106611751 coding upstream 270848 30341127 ~ 30347505 (-)
LOC110504977 LOC106611754 coding upstream 338843 30409122 ~ 30415313 (-)
LOC110504978 fbln4 coding upstream 374250 30444529 ~ 30458967 (-)
G2270239 NA non-coding downstream 8331 30058775 ~ 30059295 (-)
G2270199 NA non-coding downstream 39448 30004469 ~ 30028178 (-)
G2270197 NA non-coding downstream 65622 30000705 ~ 30002004 (-)
G2270194 NA non-coding downstream 66965 29996798 ~ 30000661 (-)
G2270193 NA non-coding downstream 72141 29993566 ~ 29995485 (-)
G2270246 NA non-coding upstream 17348 30087627 ~ 30088095 (-)
G2270252 NA non-coding upstream 30092 30100371 ~ 30100590 (-)
G2270254 NA non-coding upstream 32138 30102417 ~ 30102806 (-)
G2270257 NA non-coding upstream 37172 30107451 ~ 30107768 (-)
G2270264 NA non-coding upstream 43990 30114269 ~ 30114588 (-)
G2269291 NA other downstream 1432327 28634930 ~ 28635299 (-)
G2269277 NA other downstream 1460838 28606400 ~ 28606788 (-)
LOC110504930 LOC106611712 other downstream 1732673 28328943 ~ 28358459 (-)
G2269004 NA other downstream 2014939 28051204 ~ 28052687 (-)
LOC118946021 LOC106611696 other downstream 2115042 27828431 ~ 27952655 (-)
G2270186 NA other upstream 99 30070378 ~ 30072129 (-)
G2270673 LOC106611749 other upstream 213454 30283733 ~ 30319917 (-)
LOC110504988 LOC106515624 other upstream 498090 30566629 ~ 30575299 (-)
LOC110505004 LOC102314576 other upstream 1101969 31172148 ~ 31175109 (-)
G2272324 NA other upstream 2183104 32253383 ~ 32253938 (-)

Expression


Co-expression Network