G2270374


Basic Information

Item Value
gene id G2270374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 30212137 ~ 30212347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2597079
tcacattgcctccacaaTGCTTGACATTTTTTCtacgtctcacgaatgttctttgtAATCCGAACACCtgaaacttagatttgtctgtccataacacttttttccaatcttcctctgtccagtgtctgtgttattttgcccatcttattcttttctttttattggccagtctgagatatggctttttctttgcaactctgcctagaaggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2597079 True 211 lncRNA 0.39 1 30212137 30212347

Neighbor

gene id symbol gene type direction distance location
LOC100136647 LOC106611743 coding upstream 6449 30115525 ~ 30205688 (+)
LOC110504964 LOC106611741 coding upstream 142934 29888089 ~ 30069203 (+)
LOC110504963 LOC106611742 coding upstream 324626 29872871 ~ 29887511 (+)
LOC110504959 LOC106611740 coding upstream 364289 29838862 ~ 29847848 (+)
LOC110504961 LOC106604734 coding upstream 373429 29830922 ~ 29838708 (+)
cdx1 cdx1 coding downstream 7583 30219930 ~ 30223418 (+)
LOC110504968 LOC106611745 coding downstream 12609 30224956 ~ 30230188 (+)
LOC110504970 LOC106611748 coding downstream 59930 30272277 ~ 30282447 (+)
LOC110504971 LOC106611749 coding downstream 71352 30283699 ~ 30286467 (+)
LOC110504973 LOC106611750 coding downstream 90241 30302588 ~ 30319039 (+)
G2270364 NA non-coding upstream 3511 30208386 ~ 30208626 (+)
G2270307 NA non-coding upstream 9244 30201336 ~ 30202893 (+)
G2270258 NA non-coding upstream 103379 30108530 ~ 30108758 (+)
G2270010 NA non-coding upstream 123659 30087949 ~ 30088478 (+)
G2270001 NA non-coding upstream 150060 30061214 ~ 30062077 (+)
G2270382 NA non-coding downstream 3559 30215906 ~ 30216204 (+)
G2270388 NA non-coding downstream 19426 30231773 ~ 30231984 (+)
G2270407 NA non-coding downstream 51198 30263545 ~ 30263896 (+)
LOC110504976 mrpl11 non-coding downstream 109617 30321823 ~ 30383240 (+)
G2270478 NA non-coding downstream 170266 30382613 ~ 30427407 (+)
G2268400 LOC106611722 other upstream 1314058 28896755 ~ 28898079 (+)
G2268340 NA other upstream 1444408 28766877 ~ 28767729 (+)
G2266826 NA other upstream 3276248 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 3591189 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 3839654 26298775 ~ 26483992 (+)
G2271027 NA other downstream 964543 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 2651089 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 3203743 33328263 ~ 33421963 (+)
LOC110505080 LOC106611630 other downstream 3989736 34202011 ~ 34207415 (+)
G2274048 NA other downstream 4019648 34231995 ~ 34232604 (+)

Expression


Co-expression Network