G2270407


Basic Information

Item Value
gene id G2270407
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 30263545 ~ 30263896 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2597116
ccattgcgacctgtacgctctcgttggctggccctcgcttcatactcgtcgccaaacccactggctccatgtcatctacaagaccctgctaggtaaagtccccccttatctcagctcgctggtcaccatagcatctcccacctgtagcacacgctccagcaggtatatctctctagtcacccccaaaaccaattctttctttggctgcctctccttccagttctctgctgccaatgactggaacgaactacaaaaatctctgaaactggaaacacttatctccctcactagctttaagcaccaactgtcagagcagctcacagattactgcacctgtacatagcccacctat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2597116 True 352 lncRNA 0.51 1 30263545 30263896

Neighbor

gene id symbol gene type direction distance location
LOC110504968 LOC106611745 coding upstream 33357 30224956 ~ 30230188 (+)
cdx1 cdx1 coding upstream 40127 30219930 ~ 30223418 (+)
LOC100136647 LOC106611743 coding upstream 57857 30115525 ~ 30205688 (+)
LOC110504964 LOC106611741 coding upstream 194342 29888089 ~ 30069203 (+)
LOC110504963 LOC106611742 coding upstream 376034 29872871 ~ 29887511 (+)
LOC110504970 LOC106611748 coding downstream 8381 30272277 ~ 30282447 (+)
LOC110504971 LOC106611749 coding downstream 19803 30283699 ~ 30286467 (+)
LOC110504973 LOC106611750 coding downstream 38692 30302588 ~ 30319039 (+)
LOC110504976 mrpl11 coding downstream 57927 30321823 ~ 30383240 (+)
LOC110504981 LOC106611758 coding downstream 212786 30476682 ~ 30479893 (+)
G2270388 NA non-coding upstream 31561 30231773 ~ 30231984 (+)
G2270382 NA non-coding upstream 47341 30215906 ~ 30216204 (+)
G2270374 NA non-coding upstream 51198 30212137 ~ 30212347 (+)
G2270364 NA non-coding upstream 54919 30208386 ~ 30208626 (+)
G2270307 NA non-coding upstream 60652 30201336 ~ 30202893 (+)
G2270478 NA non-coding downstream 118717 30382613 ~ 30427407 (+)
G2270553 NA non-coding downstream 260772 30524668 ~ 30524958 (+)
G2270557 NA non-coding downstream 269005 30532901 ~ 30533121 (+)
G2270573 NA non-coding downstream 278884 30542780 ~ 30543017 (+)
G2268400 LOC106611722 other upstream 1365466 28896755 ~ 28898079 (+)
G2268340 NA other upstream 1495816 28766877 ~ 28767729 (+)
G2266826 NA other upstream 3327656 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 3642597 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 3891062 26298775 ~ 26483992 (+)
G2271027 NA other downstream 912994 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 2599540 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 3152194 33328263 ~ 33421963 (+)
LOC110505080 LOC106611630 other downstream 3938187 34202011 ~ 34207415 (+)
G2274048 NA other downstream 3968099 34231995 ~ 34232604 (+)

Expression


Co-expression Network