G2270573


Basic Information

Item Value
gene id G2270573
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 30542780 ~ 30543017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2597296
gggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttctacacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacagacctctgagactatcacagtgcaggtgcatttata

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2597296 True 238 lncRNA 0.45 1 30542780 30543017

Neighbor

gene id symbol gene type direction distance location
LOC110504986 LOC106611761 coding upstream 18340 30517331 ~ 30524440 (+)
LOC110504985 LOC106611760 coding upstream 26397 30502069 ~ 30516383 (+)
LOC110504984 LOC106604710 coding upstream 42621 30496632 ~ 30500159 (+)
LOC110504982 yif1a coding upstream 46332 30488564 ~ 30496448 (+)
LOC110504981 LOC106611758 coding upstream 62887 30476682 ~ 30479893 (+)
LOC110504990 LOC106611765 coding downstream 57012 30600029 ~ 30611248 (+)
trnaa-agc-11 NA coding downstream 109662 30652167 ~ 30706266 (+)
trnaa-agc-12 NA coding downstream 110954 30653971 ~ 30654043 (+)
trnaa-agc-13 NA coding downstream 111266 30654283 ~ 30654355 (+)
trnaa-agc-14 NA coding downstream 113371 30656388 ~ 30656460 (+)
G2270557 NA non-coding upstream 9659 30532901 ~ 30533121 (+)
G2270553 NA non-coding upstream 17822 30524668 ~ 30524958 (+)
G2270478 NA non-coding upstream 115373 30382613 ~ 30427407 (+)
LOC110504976 mrpl11 non-coding upstream 159770 30321823 ~ 30383240 (+)
G2270407 NA non-coding upstream 278884 30263545 ~ 30263896 (+)
G2270572 NA non-coding downstream 32491 30575508 ~ 30577126 (+)
G2270597 NA non-coding downstream 86678 30629695 ~ 30629970 (+)
G2270598 NA non-coding downstream 87977 30630994 ~ 30631366 (+)
G2270600 NA non-coding downstream 91486 30634503 ~ 30634771 (+)
G2268400 LOC106611722 other upstream 1644701 28896755 ~ 28898079 (+)
G2268340 NA other upstream 1775051 28766877 ~ 28767729 (+)
G2266826 NA other upstream 3606891 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 3921832 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 4170297 26298775 ~ 26483992 (+)
G2271027 NA other downstream 633873 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 2320419 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 2873073 33328263 ~ 33421963 (+)
LOC110505080 LOC106611630 other downstream 3659066 34202011 ~ 34207415 (+)
G2274048 NA other downstream 3688978 34231995 ~ 34232604 (+)

Expression


Co-expression Network