G2270922


Basic Information

Item Value
gene id G2270922
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 30967842 ~ 30968222 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2597681
gtagagtgtggtggcgagttgaaatattgattcaaaatagaccaaacagtagacgacgctatcgtggctgttcataatatattaggctaagtactgttttatactctgcactttcaattgttgtgagttcatgacgtatttcccatgttgtgttttaataggataatttagggacagttcaaaaattattgggtgagtgggggcttgtagctctcaaactctaggggtgtttttccaaacatactaccatgctccacactcatgctccgattgtattctccactccgttctcttgagtacgtttttgtgtggacgcgagtgaggagaatgcataaagcaatacattgaagaagcactcgcactccccctactgtattacct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2597681 True 381 lncRNA 0.41 1 30967842 30968222

Neighbor

gene id symbol gene type direction distance location
trnaa-agc-216 NA coding upstream 475 30967295 ~ 30967367 (+)
trnaa-agc-215 NA coding upstream 787 30966983 ~ 30967055 (+)
trnaa-agc-214 NA coding upstream 2887 30964883 ~ 30964955 (+)
trnaa-agc-213 NA coding upstream 3191 30964579 ~ 30964651 (+)
trnaa-agc-212 NA coding upstream 3503 30964267 ~ 30964339 (+)
trnaa-agc-217 NA coding downstream 1472 30969694 ~ 30969766 (+)
trnaa-agc-218 NA coding downstream 4507 30972729 ~ 30972801 (+)
trnaa-agc-219 NA coding downstream 4819 30973041 ~ 30973113 (+)
trnaa-agc-220 NA coding downstream 7223 30975445 ~ 30975517 (+)
trnaa-agc-221 NA coding downstream 7536 30975758 ~ 30975830 (+)
G2270921 NA non-coding upstream 1293 30966310 ~ 30966549 (+)
G2270916 NA non-coding upstream 16090 30951501 ~ 30951752 (+)
G2270914 NA non-coding upstream 16848 30950449 ~ 30950994 (+)
trnaa-agc-199 NA non-coding upstream 17427 30949696 ~ 30950464 (+)
trnaa-agc-11 NA non-coding upstream 261576 30652167 ~ 30706266 (+)
G2270925 NA non-coding downstream 7721 30975943 ~ 30976412 (+)
G2270926 NA non-coding downstream 8941 30977163 ~ 30977377 (+)
G2270928 NA non-coding downstream 9236 30977458 ~ 30977991 (+)
G2270939 NA non-coding downstream 27566 30995788 ~ 30996153 (+)
G2270942 NA non-coding downstream 29969 30998191 ~ 30998556 (+)
G2268400 LOC106611722 other upstream 2069763 28896755 ~ 28898079 (+)
G2268340 NA other upstream 2200113 28766877 ~ 28767729 (+)
G2266826 NA other upstream 4031953 26934720 ~ 26935889 (+)
G2266668 LOC106611853 other upstream 4346894 26588592 ~ 26620948 (+)
LOC110504416 diaph1 other upstream 4595359 26298775 ~ 26483992 (+)
G2271027 NA other downstream 208668 31176890 ~ 31181107 (+)
G2272912 LOC106611792 other downstream 1895214 32863436 ~ 32866226 (+)
LOC110505056 LOC105028844 other downstream 2447868 33328263 ~ 33421963 (+)
LOC110505080 LOC106611630 other downstream 3233861 34202011 ~ 34207415 (+)
G2274048 NA other downstream 3263773 34231995 ~ 34232604 (+)

Expression


Co-expression Network