G2271190


Basic Information

Item Value
gene id G2271190
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 31209805 ~ 31210618 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2597968
caataacataatagaaaaaaaaagaaagtctatatacagtgtgtgaggGCGTGAGGGGGCGTGAGggggtaggcaataaataggccatagtagcggagtaattacaatttagcaaattaacactggagcgaaaaatgagcagatgatgatgtgcaagtaaagatactggtgtgcaaaagagcagaaaagtaaataaaaacaatatggggatgaggtaggtagattgggtggactatgtacagctgcagcgatctgttagctgctcagatatctgatgtttaaagttagtgagggaaatgtaagtttCCAgcattggggatgaccagtgagatatacctgctggagcgagtgctacgggtgggtgttgttatcgtgaccagtgagctaagataaggcggagctttacctagcatagacttatagatgacttggagccagtgggtctggcgacgaatatgtagcaagggccagccgactagagcatacaggtcgcagtggtgggtggtataaggggctttggtaacaaaacggatggcactgtgatagactgcatcctgtttgctgagtagagtattggaagctattttgcagatgacatcgccaaagtcgaggatcggtaggatagtcagttttactaggttaagtttggcggcatgagtgaaggaggctttgttgcaaaatagaaagccgatactatatttgattttggattggaggtgtttaatatgagtctggaaggagagtttacagtctagccagacacctaggtatttgtagttgtccacatattctaggtcagaaccgtccagggtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2597968 True 814 lncRNA 0.44 1 31209805 31210618
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110505005 naa15 coding downstream 3554 31193702 ~ 31206251 (-)
LOC118946086 NA coding downstream 14427 31195244 ~ 31195378 (-)
LOC110505008 LOC106611777 coding downstream 23619 31183225 ~ 31186186 (-)
LOC110505004 LOC102314576 coding downstream 34696 31172148 ~ 31175109 (-)
hars LOC106611772 coding downstream 86974 31118101 ~ 31122831 (-)
LOC110505012 NA coding upstream 38811 31249429 ~ 31251347 (-)
LOC110505016 pcdh10 coding upstream 915678 32126296 ~ 32138798 (-)
LOC110505017 LOC106611785 coding upstream 1296395 32507013 ~ 32509252 (-)
LOC110505019 LOC106611786 coding upstream 1327130 32537748 ~ 32614415 (-)
chrnb3a LOC106611787 coding upstream 1408001 32618619 ~ 32629538 (-)
G2271189 NA non-coding downstream 680 31208923 ~ 31209125 (-)
G2271175 ndufc1 non-coding downstream 1666 31206512 ~ 31208139 (-)
G2271182 NA non-coding downstream 20468 31188431 ~ 31189337 (-)
G2271160 NA non-coding downstream 58280 31151301 ~ 31151525 (-)
G2271158 LOC106611802 non-coding downstream 61713 31146374 ~ 31148092 (-)
G2271161 NA non-coding upstream 26508 31237126 ~ 31237576 (-)
G2271167 NA non-coding upstream 33008 31243626 ~ 31244074 (-)
G2271209 NA non-coding upstream 53901 31264519 ~ 31264789 (-)
G2271214 NA non-coding upstream 62088 31272706 ~ 31272931 (-)
G2271218 NA non-coding upstream 67636 31278254 ~ 31279029 (-)
LOC110504988 LOC106515624 other downstream 634535 30566629 ~ 30575299 (-)
G2270673 LOC106611749 other downstream 889888 30283733 ~ 30319917 (-)
G2270186 NA other downstream 1137676 30070378 ~ 30072129 (-)
G2269291 NA other downstream 2574506 28634930 ~ 28635299 (-)
G2272324 NA other upstream 1042765 32253383 ~ 32253938 (-)
LOC110505054 LOC106611652 other upstream 2101298 33308270 ~ 33313952 (-)
LOC110505064 LOC106611642 other upstream 2487967 33693783 ~ 33765421 (-)
LOC110505071 LOC106611637 other upstream 2856077 34008192 ~ 34106811 (-)
G2275717 NA other upstream 3941300 35151918 ~ 35152583 (-)

Expression

G2271190 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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G2271190 Expression in each Bioproject

Bar chart with 20 bars.
G2271190 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network