Gene
RNA
| Item | Value |
|---|---|
| gene id | G2272601 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 32367965 ~ 32423986 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| putative transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2599466 | True | 238 | lncRNA | 0.47 | 2 | 32367965 | 32423986 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505016 | pcdh10 | coding | downstream | 229167 | 32126296 ~ 32138798 (-) |
| LOC110505012 | NA | coding | downstream | 1116618 | 31249429 ~ 31251347 (-) |
| LOC110505005 | naa15 | coding | downstream | 1161714 | 31193702 ~ 31206251 (-) |
| LOC118946086 | NA | coding | downstream | 1172587 | 31195244 ~ 31195378 (-) |
| LOC110505008 | LOC106611777 | coding | downstream | 1181779 | 31183225 ~ 31186186 (-) |
| LOC110505017 | LOC106611785 | coding | upstream | 83027 | 32507013 ~ 32509252 (-) |
| LOC110505019 | LOC106611786 | coding | upstream | 113762 | 32537748 ~ 32614415 (-) |
| chrnb3a | LOC106611787 | coding | upstream | 194633 | 32618619 ~ 32629538 (-) |
| LOC110505020 | LOC106611788 | coding | upstream | 224284 | 32648270 ~ 32671869 (-) |
| LOC110505023 | LOC106611789 | coding | upstream | 263291 | 32687277 ~ 32711042 (-) |
| G2272441 | NA | non-coding | downstream | 18626 | 32349120 ~ 32349339 (-) |
| G2272435 | NA | non-coding | downstream | 20765 | 32346955 ~ 32347200 (-) |
| G2272434 | NA | non-coding | downstream | 21222 | 32346527 ~ 32346743 (-) |
| G2272421 | NA | non-coding | downstream | 32698 | 32335059 ~ 32335267 (-) |
| G2272381 | NA | non-coding | downstream | 58751 | 32309001 ~ 32309214 (-) |
| G2272681 | NA | non-coding | upstream | 109312 | 32533298 ~ 32533867 (-) |
| G2272768 | NA | non-coding | upstream | 197761 | 32621747 ~ 32621978 (-) |
| G2272816 | NA | non-coding | upstream | 250404 | 32674390 ~ 32674605 (-) |
| G2272324 | NA | other | downstream | 114027 | 32253383 ~ 32253938 (-) |
| LOC110505004 | LOC102314576 | other | downstream | 1192914 | 31172148 ~ 31175109 (-) |
| LOC110504988 | LOC106515624 | other | downstream | 1792695 | 30566629 ~ 30575299 (-) |
| G2270673 | LOC106611749 | other | downstream | 2048048 | 30283733 ~ 30319917 (-) |
| G2270186 | NA | other | downstream | 2295836 | 30070378 ~ 30072129 (-) |
| LOC110505054 | LOC106611652 | other | upstream | 887930 | 33308270 ~ 33313952 (-) |
| LOC110505064 | LOC106611642 | other | upstream | 1274599 | 33693783 ~ 33765421 (-) |
| LOC110505071 | LOC106611637 | other | upstream | 1642709 | 34008192 ~ 34106811 (-) |
| G2275717 | NA | other | upstream | 2727932 | 35151918 ~ 35152583 (-) |
| LOC110505098 | LOC106611615 | other | upstream | 3169439 | 35593425 ~ 35600758 (-) |
