Gene
RNA
| Item | Value |
|---|---|
| gene id | G2272912 |
| gene name | LOC106611792 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050571.1 |
| NCBI id | CM025858.1 |
| chromosome length | 44108611 |
| location | 32863436 ~ 32866226 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ankyrin repeat domain-containing protein 13D-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2599828 | False | 254 | TUCP | 0.58 | 2 | 32863436 | 32863779 |
| TU2599829 | True | 637 | lncRNA | 0.43 | 3 | 32863436 | 32866226 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505027 | LOC106611793 | coding | upstream | 7678 | 32851302 ~ 32855758 (+) |
| LOC110505015 | pcdh18 | coding | upstream | 1252043 | 31604683 ~ 31611393 (+) |
| LOC110505014 | LOC106611782 | coding | upstream | 1447910 | 31404753 ~ 31415526 (+) |
| LOC110505011 | LOC106611780 | coding | upstream | 1617251 | 31238912 ~ 31246185 (+) |
| LOC110505010 | LOC106611779 | coding | upstream | 1628796 | 31217229 ~ 31234640 (+) |
| LOC110505032 | LOC106611681 | coding | downstream | 64615 | 32930841 ~ 32941664 (+) |
| LOC110504156 | LOC106611678 | coding | downstream | 118980 | 32985206 ~ 33000002 (+) |
| LOC110505037 | LOC106611663 | coding | downstream | 169432 | 33035658 ~ 33079748 (+) |
| LOC110505039 | LOC106611665 | coding | downstream | 219689 | 33085915 ~ 33089436 (+) |
| LOC110505043 | LOC106611661 | coding | downstream | 276854 | 33143080 ~ 33153275 (+) |
| G2272910 | NA | non-coding | upstream | 1209 | 32860875 ~ 32862227 (+) |
| G2272905 | NA | non-coding | upstream | 5952 | 32856983 ~ 32857484 (+) |
| G2272893 | NA | non-coding | upstream | 30429 | 32829837 ~ 32833007 (+) |
| G2272885 | LOC106611790 | non-coding | upstream | 40083 | 32822163 ~ 32823353 (+) |
| G2272873 | NA | non-coding | upstream | 72663 | 32782249 ~ 32790773 (+) |
| G2272942 | NA | non-coding | downstream | 51352 | 32917578 ~ 32918418 (+) |
| G2272943 | NA | non-coding | downstream | 55897 | 32922123 ~ 32922768 (+) |
| G2273050 | LOC100286423 | non-coding | downstream | 108162 | 32974388 ~ 32976494 (+) |
| G2273051 | LOC100286423 | non-coding | downstream | 115218 | 32981444 ~ 32983211 (+) |
| G2273087 | NA | non-coding | downstream | 170878 | 33037104 ~ 33037514 (+) |
| G2271027 | NA | other | upstream | 1682329 | 31176890 ~ 31181107 (+) |
| G2268400 | LOC106611722 | other | upstream | 3965357 | 28896755 ~ 28898079 (+) |
| G2268340 | NA | other | upstream | 4095707 | 28766877 ~ 28767729 (+) |
| G2266826 | NA | other | upstream | 5927547 | 26934720 ~ 26935889 (+) |
| G2266668 | LOC106611853 | other | upstream | 6242488 | 26588592 ~ 26620948 (+) |
| LOC110505056 | LOC105028844 | other | downstream | 549864 | 33328263 ~ 33421963 (+) |
| LOC110505080 | LOC106611630 | other | downstream | 1335857 | 34202011 ~ 34207415 (+) |
| G2274048 | NA | other | downstream | 1365769 | 34231995 ~ 34232604 (+) |
| nudt6 | nudt6 | other | downstream | 2057732 | 34923553 ~ 34939399 (+) |
| G2282300 | NA | other | downstream | 7377195 | 40243421 ~ 40243722 (+) |
| G2272858 | NA | non-coding | upstream | 63839 | 32718113 ~ 32799597 (+) |
