XLOC_004163 (acad9)


Basic Information

Item Value
gene id XLOC_004163
gene name acad9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 26685982 ~ 26701611 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007957
GACGTCATCAATGTGAGACGAAAACGGGTGAAAGGTGTTTCAGTGTGAGTCGTAGGGTGATTCGTAATTAGGGTAAATATCAACGTTGAAGATGAGCCTGAACAAATTTATTGTTTTGTCAAGATCTGTAAGGCGTGGGAGGAATTTATTCGCTGTTCGTGTCGCGCAAACAGGAGAATATCTTTATCAGTTTCAGTCGCAGCGCTTCATTAGGTCCAGCTCGAGGAGTTTAGCTTATGCAAAAGATCTGTTCCTGGGCAAAGTTAACAAGAAAGAAGTGTTTCCCTATCCAGAAATCAGCAATGAAGAATTAGAAGAGTTAAACCAGTTTGTTCAGCCTGTGGAAAAGTTTTTCAATGAAAGTGTTGACTCTGCGAAGATCGATAGGGAGGCCAATATTCCCCCTGAGACTTTGGATGGACTAAAAGAACTGGGTCTGTTTGGGATCCAGATACCTGAAGAATATGGGGGCCTGGGACTCTCAAACACCATGTATGCCAGGTTAGGAGAGATCACGTCTTTAGATGGGTCTATTGCAGTCACACTTGCAGCACATCAGGCCATCGGCCTGAAGGGTATATTAATAGCTGGAACGGATGCTCAGAAAGCAAAATATCTGCCCAAACTAGCAACAGGAGAACATATAGCAGCTTTCTGCCTCACCGAACCTGGAAGTGGCAGTGATGCTGCATCTATACAGCTGAGAGCCACGCTAACAGAAGATGGGAAGCACTACCTGCTCAATGGCACAAAGTTTTGGATTTCCAATGGTGGATGGGCAGACATCATGACTGTGTTTGCCAGAACTGAAGTTGTTGATAAAGATGGTCAAAAGAAAGATAAGATCACAGCGTTCATTGTGGAAAGAGCATTCGGTGGAGTCACCAGTGGAAAACCTGAAGACAAACTGGGCATCAGAGGGTCAAACACGACTGAGATCACATTTGAAGACACAAAAGTGCCTATCGAGAACGTAATTGGTGAAGTTGGTGATGGTTTTAAGGTCGCAATGAACATCCTGAATAATGGGCGCTTTAGCATGGGCGGTGCAGGTGCAGGGGTGGTCAAGAAACTCATTGAGCTGTCAGCAGAATATGCAGGCACAAGAAAACAATTCAACAGAAGGCTTTCAGAGTTTGGAATGATTCAGGACAAGTTTGCCACTATGGCCCTGAATGTGTATGTGATGGAGAGTATGGCGTACCTCACTGCTGGAATGATGGACCGCCCTGGACTCCCAGACTGCTCTCTGGAGGCCGCGATGGTCAAGGTCTTTAGTTCTGAGGGCACCTGGATCTGTGTGAGTGAAGCTCTGCAGGTTTTAGGAGGTCTGGGTTTCACTAAGAACTACCCCTACGAGCGCTACCTCAGGGACTGCCGCATCCTCCAAATATTTGAGGGCACTAATGAAATTTTGAGGATGTACGTCGCACTTACAGGGATGCAGTATGCTGGCAAAATATTAACTGGAAAAATAAAGGAGATGAAGAAAGGAAATTTAGGCGTGGTGTTCGAGATTCTGGGGAAGAAAATCAAGGACACAGTGCAGACGGCAGATTTTGGGCTCACCGGCAAAGATGGTGTTGTTCATCCCAGTCTGACGGAGAGCGCCAAAATGTTTGAGCAGAACGCTGCATGTTTTGGCTCCACTGTTGAAGGTTTGCTGTACCGATATGGAAAGACAATTGTCGATGAGCAGCTtctgttgaagaaagttgcagaTGTGTTAATTAACCTCTACGCCATGACAGCCGTCCTGTCCCGCTCCTCTCGCTCCATCTCCATCGGCCTGCGCAACCATGACCATGAGGTGCTGCTCACCAACACTTTCTGCAAGGATGCTCATTTCAAGAACAACTACATGTTGAGTCAGCTTCAAAGATATTCCCCAGAGAATGATGATGCCAACATAAAGAAGATCGCCCAGGATGTCTTAGCCAAGAGGGCATATATCTGCTCACATCCCCTGGAAAGAACCTTCTGACGCACACTTGTGTCTTAGTTTTAACCCAACAGAAGTGCTTTGATTATTAAATATACTTATGTTTCTCACAATATGCAGTATTAATTAAGCCTCATACTGTAATGAAGTAGTCCTTTTATATCAGTATGTCCCAATTTAAAGGCTTTTgcacactcagtgcatcacagCAGCGCATTGAAGGCCGTCCCATTTGGAAACATATCCTCAAAATGTGTCTTTTGTTTCCTGGGCCACTGATGACATTTGTTGTGCACAGGAAATAACAggtgtgttgttttttatttttaaatgtaagtatTAGGTATCAACTTGCTTATATCTAACAGTTCTatgtacaaaaaaaacaatattaaatgttaaaaaacatta

Function

symbol description
acad9 Predicted to enable fatty-acyl-CoA binding activity and very-long-chain-acyl-CoA dehydrogenase activity. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 20. Orthologous to human ACAD9 (acyl-CoA dehydrogenase family member 9).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005739 mitochondrion cellular_component
GO:0000062 fatty-acyl-CoA binding molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0017099 very-long-chain-acyl-CoA dehydrogenase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0003995 acyl-CoA dehydrogenase activity molecular_function
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors molecular_function

KEGG:

id description
ko03029 Mitochondrial biogenesis

ZFIN:

id description
ZDB-GENE-060616-196 Predicted to enable fatty-acyl-CoA binding activity and very-long-chain-acyl-CoA dehydrogenase activity. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 20. Orthologous to human ACAD9 (acyl-CoA dehydrogenase family member 9).

Ensembl:

ensembl_id ENSDARG00000055620

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007957 True 2353 mRNA 0.44 18 26685982 26701611

Neighbor

gene id symbol gene type direction distance location
XLOC_004162 efcc1 coding downstream 19355 26619133 ~ 26666627 (-)
XLOC_004161 st3gal8 coding downstream 95553 26568492 ~ 26590429 (-)
XLOC_004160 utp3 coding downstream 310407 26370381 ~ 26375575 (-)
XLOC_004159 foxj3 coding downstream 323648 26228918 ~ 26362334 (-)
XLOC_004158 prdm2b coding downstream 468472 26189703 ~ 26217510 (-)
XLOC_004164 iqsec1b coding upstream 2570 26704181 ~ 27057572 (-)
XLOC_004165 CR847934.1 coding upstream 46681 26748292 ~ 26748429 (-)
XLOC_004166 wnt7aa coding upstream 784973 27486584 ~ 27501027 (-)
XLOC_004167 NA coding upstream 800594 27502205 ~ 27507973 (-)
XLOC_004168 ptpdc1a coding upstream 809666 27511277 ~ 27537661 (-)
XLOC_004063 CR854846.1 misc downstream 10558304 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 13994291 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 14064215 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 14094686 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 14172720 12512966 ~ 12513262 (-)
XLOC_004152 CR933820.1 non-coding downstream 1016027 25669839 ~ 25669955 (-)
XLOC_004150 NA non-coding downstream 1209002 25475305 ~ 25476980 (-)
XLOC_004147 NA non-coding downstream 1277086 25368112 ~ 25408896 (-)
XLOC_004144 dre-mir-499 non-coding downstream 1480739 25205153 ~ 25205243 (-)
XLOC_004142 CR628365.2 non-coding downstream 1718095 24967771 ~ 24967887 (-)
XLOC_004169 NA non-coding upstream 841967 27543578 ~ 27625465 (-)
XLOC_004173 BX601648.1 non-coding upstream 1082147 27783758 ~ 27806767 (-)
XLOC_004174 NA non-coding upstream 1099248 27800859 ~ 27809715 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000306_03814414_03823373 ACAD9, ACAD9.S coding CI01000306 null 3814414 ~ 3823373 (-)