LOC118946552


Basic Information

Item Value
gene id LOC118946552
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 52015 ~ 52147 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005041423.1
TGCAGCATTGTCAAATTCCATGTTTTCTCTACAATGGACTGTACTGGCCAAAATGGCTGCCACAGTGCGTAATTCATGAGCCCCACATCCCTCTGGCATGATTGCTGGGGATAAATGTGTTCTACAGACAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005041423.1 True 133 mRNA 0.45 1 52015 52147

Neighbor

gene id symbol gene type direction distance location
rnf19a LOC106570787 coding downstream 27781 79928 ~ 134719 (+)
stk3 stk3 coding downstream 102829 154976 ~ 174427 (+)
LOC110489350 uk114 coding downstream 123660 175807 ~ 205517 (+)
rpl30 LOC106589133 coding downstream 181529 233676 ~ 240640 (+)
spire1a LOC106589129 coding downstream 264756 316903 ~ 349528 (+)
pabpc1b LOC106570793 non-coding upstream 721 45493 ~ 60677 (+)
G2287167 NA non-coding upstream 8679 43117 ~ 43336 (+)
G2287160 NA non-coding upstream 17167 23604 ~ 34848 (+)
G2287182 NA non-coding downstream 25412 77559 ~ 77991 (+)
G2287201 NA non-coding downstream 47506 99653 ~ 168304 (+)
G2287226 NA non-coding downstream 111070 163217 ~ 163694 (+)
G2287230 NA non-coding downstream 125802 177949 ~ 180253 (+)
G2287470 NA other downstream 434646 486793 ~ 487661 (+)
G2287973 NA other downstream 1221227 1273374 ~ 1274170 (+)
triqk triqk other downstream 2156975 2209019 ~ 2255119 (+)
G2288669 NA other downstream 2269727 2321874 ~ 2324182 (+)

Expression


Co-expression Network