LOC110489350 (uk114)


Basic Information

Item Value
gene id LOC110489350
gene name uk114
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 175807 ~ 205517 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036970855.1
AATGGCCTCCTCCGCCCCTAGCTTGTAGCACCGCTAGCGTGATGCCAGCCACAGCAGATACTTTGCCCCAGCAGTGTTTGTCGAGACAAAGGTTTTCCTGAACAGCGGTTCACTTCACTTTGTCCCAAGCTGAGGTCTGTGACTGTAGTTTACTCTGGACACGATGGCTGCTGTTCAGAAACTATTTCCTTATACTCCTAAAGCACCTATAAGACAGGGGATTTACAGCCAGGCGGTGGTGGTGGATCGGACCATGTACATCTCCGGCCAGCTGGGGCTAGACGTGGCCTCAGGGAAGCTGGTGGAGGGAGGGGTACAGGCTCAGGCCAGACAGGCTCTGGTCAATATGGGAGAGATCCTGAAAGCAGCTGGATGTGGTTATGACAATGTCGTCAAGACAACCGTGCTGTTGGCAGACATTAATGACTTTGTCAACGTCAACGATGTTTATAAGACATttTTCAGCAAAAACTTCCCTGCCAGAGCTGCCTACCAGGTTGTTGCCCTCCCCAGAGATGGTCTGGTGGAGATCGAGGCTGTGGCTGTTCTGGGACCCATCTCTGAGTCCTGACTAACCGGCCAGAGCATCAACAAGCTGTAAACTAACTAACCTGGAAGTGAACGTTTAACAACCTTGAAATAGTCATAGTTTAAATATTAATTAAATTAACCCAAACCACTCTTAGACTTAGACTACACTGCTCAGACATTCTAAGGCCTTGAAGAGGATATATAATGTCATAACATGTTCCTgtttgtacactgaacaaaaatataaatgcaacatctaaagtgttggtcccatgtttcatgagctgaaataaagatcccagaaaagttccatgtaaaaaaaaaaagcttatttctctcaaaatcCATACACAGACCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATATACATGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATATACAGGCCTTACCCAAAGCCATACACAGGCCTTACTCAAAGCCATACACAGGCCTTACCCAAAGCCATACACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATATACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATATACACAGGCCTTACCCAAAGCCATATACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATATACAGGCCTTACCCAAAGCCATATACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATACACAGGCCTTAGCCAAAGCCATACACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATATACAGGCCTTACCCAAAGCCATATACAGGCCTTACCCAAAGCCATACACACAGGCCTTACCCAAAGCCATACACACAGGCCTTACCCAAAGCCATATACAGGCCTTACCCAAAGCCATGTACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATACACAGGCCATACCCAAAGCCATATACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATATACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATACACAGGCCTTACCCAAAGCCATACACATGCCTTACCCAAAGC

Function

symbol description
uk114 Predicted to enable 2-iminobutanoate deaminase activity. Involved in protein folding. Predicted to be active in cytosol and mitochondrion. Is expressed in several structures, including adult head; adult heart; embryonic/larval posterior spiracle; and gut section. Orthologous to human RIDA (reactive intermediate imine deaminase A homolog).

NR:

description
Ribonuclease UK114

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0019239 deaminase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036970855.1 True 1856 mRNA 0.48 6 175807 205517

Neighbor

gene id symbol gene type direction distance location
stk3 stk3 coding upstream 1380 154976 ~ 174427 (+)
rnf19a LOC106570787 coding upstream 42414 79928 ~ 134719 (+)
pabpc1b LOC106570793 coding upstream 115130 45493 ~ 60677 (+)
rpl30 LOC106589133 coding downstream 28159 233676 ~ 240640 (+)
spire1a LOC106589129 coding downstream 111386 316903 ~ 349528 (+)
psmg2 psmg2 coding downstream 270715 476232 ~ 482157 (+)
seh1l seh1l coding downstream 359607 565124 ~ 587159 (+)
rnmt rnmt coding downstream 391245 596762 ~ 616427 (+)
G2287201 NA non-coding upstream 7503 99653 ~ 168304 (+)
G2287226 NA non-coding upstream 12113 163217 ~ 163694 (+)
G2287182 NA non-coding upstream 97816 77559 ~ 77991 (+)
G2287248 NA non-coding downstream 9946 215463 ~ 216460 (+)
G2287250 NA non-coding downstream 12056 217573 ~ 260640 (+)
G2287264 NA non-coding downstream 49524 255041 ~ 302892 (+)
G2287265 NA non-coding downstream 51040 256557 ~ 259143 (+)
G2287268 NA non-coding downstream 58718 264235 ~ 264879 (+)
G2287470 NA other downstream 281276 486793 ~ 487661 (+)
G2287973 NA other downstream 1067857 1273374 ~ 1274170 (+)
triqk triqk other downstream 2003605 2209019 ~ 2255119 (+)
G2288669 NA other downstream 2116357 2321874 ~ 2324182 (+)

Expression


Co-expression Network