psmg2 (psmg2)


Basic Information

Item Value
gene id psmg2
gene name psmg2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 476232 ~ 482157 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021559712.2
CACAACAAATATCTCCCTCGTTCTTTTATTTTAAGACTTATATTGGAACTTTCAATGAAGTTACAATTAAATATAGAAGTTTATTTTTGTCAAATcttataaatatatttaaaatgttgACTTCTATGGCAGTACAACAATATTTTTATTCAGGCATCTGATAACGCACCAACATCGACGCCATCTATGTTCTTAAAGGCCCATTTCCAGTTTGCAAGAAGTGAAAGTAAATGGGAATTTATTACAACCAAAACACTCTGAAAGTGGTTGATTGAACAGTAATTAAGTTGTTTCATTCTCAACACACATGATGTTTGTCGCGGCAGAATGCACCCCAACGTCTTTTAAAGGCTTTACCCTGATTATGCCAGCAATCTCTGTTGGAAATGTGGGGCAGCTGGCAGTGGACCTGATTGTTTCTACGCTCAACATGTGTCGAGTCGGATACATCCACACTGACTGTCTCATCCCTATGGCAGGGAACAACCCTTATGCTACATTCGCTGAGAACGCCAACGACCTCAGTACCAATGCAGAAGTGTACTCTTCTCCAGAGTTGAGGTTGGCAGTTCTTCAGATCAGAACCCCAATTATCCAGACAAAGTCCAAGAAGTTCTGTAAGCTGATGGTGTCTTGGATCAAAGCCAGTGGTTTCTCCAGGACTGTCGTGCTGTCCAGCAGTCATGCTTACCAGAGGGATGACCAACAGCTACTGGGGTCTCCCCTGCGTTACCTGCAGACTCCCTCCATGCAGAAGGTGACTGGTGACCGGCTGAAGGAGATGGATtggaaggagatggagacagtaTCTACCTTCCCTGGGGTTACTGACTCAGAGCAGCGCCTCTATATACCTGGAGGGGGCGCCACTAAAGGCCTCTTCACTGACAGATGTTTGAGGCTGGTGTACCAAAcagaaagtaaaagatgcaaaaactacATTTAAGAATGGGAAGTATAGAGATCTGTACCGCgtcttagactggctt
>XM_036971455.1
CACAACAAATATCTCCCTCGTTCTTTTATTTTAAGACTTATATTGGAACTTTCAATGAAGTTACAATTAAATATAGAAGTTTATTTTTGTCAAATcttataaatatatttaaaatgttgACTTCTATGGCAGTACAACAATATTTTTATTCAGGCATCTGATAACGCACCAACATCGACGCCATCTATGTTCTTAAAGGCCCATTTCCAGTTTGCAAGAAGTGAAAGTAAATGGGAATTTATTACAACCAAAACACTCTGAAAGTGGTTGATTGAACAGTAATTAAGTTGTTTCATTCTCAACACACATGATGTTTGTCGCGGCAGAATGCACCCCAACGTCTTTTAAAGGCTTTACCCTGATTATGCCAGCAATCTCTGTTGGAAATGTGGGGCAGCTGGCAGTGGACCTGATTGTTTCTACGCTCAACATGTGTCGAGTCGGATACATCCACACTGACTGTCTCATCCCTATGGCAGGGAACAACCCTTATGCTACATTCGCTGAGAACGCCAACGACCTCAGTACCAATGCAGAAGTGTACTCTTCTCCAGAGTTGAGGTTGGCAGTTCTTCAGATCAGAACCCCAATTATCCAGACAAAGTCCAAGAAGTTCTGTAAGCTGATGGTGTCTTGGATCAAAGCCAGTGGTTTCTCCAGGACTGTCGTGCTGTCCAGCAGTCATGCTTACCAGAGGGATGACCAACAGCTACTGGGGTCTCCCCTGCGTTACCTGCAGACTCCCTCCATGCAGAAGGTGACTGGTGACCGGCTGAAGGAGATGGATtggaaggagatggagacagtaTCTACCTTCCCTGGGGTTACTGACTCAGAGCAGCGCCTCTATATACCTGGAGGGGGCGCCACTAAAGGCCTCTTCACTGACAGCTGTGCTGAGGACATTCTTCTCCATGGTGTTGTCTCTGTGTTCCAGCTGTGCTGAGGACATTCCTCTTCATGGTTTTGTCTCTGTGTTCCAGCTGTGCTGAGGACATTCTTCTCCATGGTGTTGTCTCTGTGTTCCAGCTGTGCTGAGGACATTCTTCTCCAT
>XM_036971456.1
CACAACAAATATCTCCCTCGTTCTTTTATTTTAAGACTTATATTGGAACTTTCAATGAAGTTACAATTAAATATAGAAGTTTATTTTTGTCAAATcttataaatatatttaaaatgttgACTTCTATGGCAGTACAACAATATTTTTATTCAGGCATCTGATAACGCACCAACATCGACGCCATCTATGTTCTTAAAGGCCCATTTCCAGTTTGCAAGAAGTGAAAGTAAATGGGAATTTATTACAACCAAAACACTCTGAAAGTGGTTGATTGAACAGTAATTAAGTTGTTTCATTCTCAACACACATGATGTTTGTCGCGGCAGAATGCACCCCAACGTCTTTTAAAGGCTTTACCCTGATTATGCCAGCAATCTCTGTTGGAAATGTGGGGCAGCTGGCAGTGGACCTGATTGTTTCTACGCTCAACATGTGTCGAGTCGGATACATCCACACTGACTGTCTCATCCCTATGGCAGGGAACAACCCTTATGCTACATTCGCTGAGAACGCCAACGACCTCAGTACCAATGCAGAAGTGTACTCTTCTCCAGAGTTGAGGTTGGCAGTTCTTCAGATCAGAACCCCAATTATCCAGACAAAGTCCAAGAAGTTCTGTAAGCTGATGGTGTCTTGGATCAAAGCCAGTGGTTTCTCCAGGACTGTCGTGCTGTCCAGCAGTCATGCTTACCAGAGGGATGACCAACAGCTACTGGGGTCTCCCCTGCGTTACCTGCAGACTCCCTCCATGCAGAAGGTGACTGGTGACCGGCTGAAGGAGATGGATtggaaggagatggagacagtaTCTACCTTCCCTGGGGTTACTGACTCAGAGCAGCGCCTCTATATACCTGGAGGGGGCGCCACTAAAGGCCTCTTCACTGACAGCTGTGCTGAGGACATTCCTCTTCATGGTTTTGTCTCTGTGTTCCAGCTGTGCTGAGGACATTCTTCTCCATGGTGTTGTCTCTGTGTTCCAGCTGTGCTGAGGACATTCTTCTCCATGGTGTTGTCTCTGTGTTCCAGCTGTGCTGAGGACATTCCTCTTCATGGTTTTGTCTC
>XR_005041349.1
ACAACAAATATCTCCCTCGTTCTTTTATTTTAAGACTTATATTGGAACTTTCAATGAAGTTACAATTAAATATAGAAGTTTATTTTTGTCAAATcttataaatatatttaaaatgttgACTTCTATGGCAGTACAACAATATTTTTATTCAGGCATCTGATAACGCACCAACATCGACGCCATCTATGTTCTTAAAGGCCCATTTCCAGTTTGCAAGAAGTGAAAGTAAATGGGAATTTATTACAACCAAAACACTCTGAAAGTGGTTGATTGAACAGTAATTAAGTTGTTTCATTCTCAACACACATGATGTTTGTCGCGGCAGAATGCACCCCAACGTCTTTTAAAGGCTTTACCCTGATTATGCCAGCAATCTCTGTTGGAAATGTGGGGCAGCTGGCAGTGGACCTGATTGTTTCTACGCTCAACATGTGTCGAGTCGGATACATCCACACTGACTGTCTCATCCCTATGGCAGGGAACAACCCTTATGCTACATTCGCTGAGAACGCCAACGACCTCAGTACCAATGCAGAAGTGTACTCTTCTCCAGAGTTGAGGTTGGCAGTTCTTCAGATCAGAACCCCAATTATCCAGACAAAGTCCAAGAAGTTCTGTAAGCTGATGGTGTCTTGGATCAAAGCCAGTGGTTTCTCCAGGACTGTCGTGCTGTCCAGCAGTCATGCTTACCAGAGGGATGACCAACAGCTACTGGGGTCTCCCCTGCGTTACCTGCAGACTCCCTCCATGCAGAAGGTGACTGGTGACCGGCTGAAGGAGATGGATtggaaggagatggagacagtaTCTACCTTCCCTGGGGTTACTGACTCAGAGCAGCGCCTCTATATACCTGGAGGGGGCGCCACTAAAGGCCTCTTCACTGACAGCTGTGCTGAGGACATTCTTCTCCATGGTGTTGTCTCTGTGTTCCAGCTGTGCTGAGGACATTCCTCTGGTGGTGGTGCTGATCTTCTGCTCTGAAGGAGACAACATCCCAGACGCCTTCACTCTCCTCAACCACCTCAACACTTGGCTCCACCTAGTGGACGCACCTGCCCAGACGCAGCCAAAGTGGAGGATACCAGCATCATGGAGGCTTCTCTTTGGCAGTGGCATCCCCCCTGCACTCTTCTAAATCACCCAGTGGAATCTCCCCTGCCCCAACTCTCCTAAATCACCCAGTGGAATCACCCCTGCCCCAACTCTTCTAAATCACCCAGTGGAATCTCCCCTGCCCCAACTCTCCTAAATCACCCAGTGGAATCTCCCCTGCCCCAACTCTCCTAAATCACCCAGTGGAATCACCCCTGCCCCAACTCTTCTAAATCACCCAGTGGAATCACCCCCTACCCCAACTCTTCTAAATCACCCAGTGGAATCACCCCCTGCCCCAACTCTCCTAAATCACCCTGTGGAATCCCCCCTACCCCAACTCTCCCCTGCCCCAACCGGTGTTATGAGTCCAGGTTTATAGTCCTGAAGTGTGCCTAGTGGTTATCATTACCTACCCTGGTGATGAGAATCAATATTTACTCTACGGTTATTAAAAGTATTAAATCATC
>XM_036971454.1
ATCTCCCTCGTTCTTTTATTTTAAGACTTATATTGGAACTTTCAATGAAGTTACAATTAAATATAGAAGTTTATTTTTGTCAAATcttataaatatatttaaaatgttgACTTCTATGGCAGTACAACAATATTTTTATTCAGGCATCTGATAACGCACCAACATCGACGCCATCTATGTTCTTAAAGGCCCATTTCCAGTTTGCAAGAAGTGAAAGTAAATGGGAATTTATTACAACCAAAACACTCTGAAAGTGGTTGATTGAACAGTAATTAAGTTGTTTCATTCTCAACACACATGATGTTTGTCGCGGCAGAATGCACCCCAACGTCTTTTAAAGGCTTTACCCTGATTATGCCAGCAATCTCTGTTGGAAATGTGGGGCAGCTGGCAGTGGACCTGATTGTTTCTACGCTCAACATGTGTCGAGTCGGATACATCCACACTGACTGTCTCATCCCTATGGCAGGGAACAACCCTTATGCTACATTCGCTGAGAACGCCAACGACCTCAGTACCAATGCAGAAGTGTACTCTTCTCCAGAGTTGAGGTTGGCAGTTCTTCAGATCAGAACCCCAATTATCCAGACAAAGTCCAAGAAGTTCTGTAAGCTGATGGTGTCTTGGATCAAAGCCAGTGGTTTCTCCAGGACTGTCGTGCTGTCCAGCAGTCATGCTTACCAGAGGGATGACCAACAGCTACTGGGGTCTCCCCTGCGTTACCTGCAGACTCCCTCCATGCAGAAGGTGACTGGTGACCGGCTGAAGGAGATGGATtggaaggagatggagacagtaTCTACCTTCCCTGGGGTTACTGACTCAGAGCAGCGCCTCTATATACCTGGAGGGGGCGCCACTAAAGGCCTCTTCACTGACAGCTGTGCTGAGGACATTCCTCTGGTGGTGGTGCTGATCTTCTGCTCTGAAGGAGACAACATCCCAGACGCCTTCACTCTCCTCAACCACCTCAACACTTGGCTCCACCTAGTGGACGCACCTGCCCAGACGCAGCCAAAGTGGAGGATACCAGCATCATGGAGGCTTCTCTTTGGCAGTGGCATCCCCCCTGCACTCTTCTAAATCACCCAGTGGAATCTCCCCTGCCCCAACTCTCCTAAATCACCCAGTGGAATCACCCCTGCCCCAACTCTTCTAAATCACCCAGTGGAATCTCCCCTGCCCCAACTCTCCTAAATCACCCAGTGGAATCTCCCCTGCCCCAACTCTCCTAAATCACCCAGTGGAATCACCCCTGCCCCAACTCTTCTAAATCACCCAGTGGAATCACCCCCTACCCCAACTCTTCTAAATCACCCAGTGGAATCACCCCCTGCCCCAACTCTCCTAAATCACCCTGTGGAATCCCCCCTACCCCAACTCTCCCCTGCCCCAACCGGTGTTATGAGTCCAGGTTTATAGTCCTGAAGTGTGCCTAGTGGTTATCATTACCTACCCTGGTGATGAGAATCAATATTTACTCTACGGTTATTAAAAGTATTAAATCATC

Function

symbol description
psmg2 Predicted to be involved in chaperone-mediated protein complex assembly and proteasome assembly. Predicted to be active in cytosol and nucleus. Orthologous to human PSMG2 (proteasome assembly chaperone 2).

NR:

description
proteasome assembly chaperone 2 isoform X1

GO: NA

KEGG:

id description
K11876 PSMG2, PAC2; proteasome assembly chaperone 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021559712.2 False 989 mRNA 0.44 6 476232 480567
XM_036971455.1 False 1054 mRNA 0.45 6 476232 480778
XM_036971456.1 False 1065 mRNA 0.45 6 476232 480835
XR_005041349.1 False 1565 mRNA 0.48 7 476233 482157
XM_036971454.1 True 1510 mRNA 0.48 7 476242 482157

Neighbor

gene id symbol gene type direction distance location
spire1a LOC106589129 coding upstream 126704 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 236664 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 270715 175807 ~ 205517 (+)
stk3 stk3 coding upstream 301805 154976 ~ 174427 (+)
rnf19a LOC106570787 coding upstream 342839 79928 ~ 134719 (+)
seh1l seh1l coding downstream 82967 565124 ~ 587159 (+)
rnmt rnmt coding downstream 114605 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 256464 738621 ~ 899937 (+)
LOC110487806 LOC106570773 coding downstream 454165 936322 ~ 962116 (+)
ncaldb LOC105006551 coding downstream 798776 1280933 ~ 1361298 (+)
G2287456 NA non-coding upstream 4597 471322 ~ 471635 (+)
G2287453 NA non-coding upstream 7645 468146 ~ 468587 (+)
G2287451 NA non-coding upstream 12569 463462 ~ 463663 (+)
G2287449 NA non-coding upstream 12977 439106 ~ 463255 (+)
G2287448 NA non-coding upstream 39005 436748 ~ 437227 (+)
G2287464 NA non-coding downstream 403 482560 ~ 482891 (+)
G2287466 NA non-coding downstream 1026 483183 ~ 483457 (+)
G2287469 NA non-coding downstream 3239 485396 ~ 486605 (+)
G2287473 NA non-coding downstream 17237 499394 ~ 549250 (+)
G2287482 NA non-coding downstream 75748 557905 ~ 575122 (+)
G2287470 NA other downstream 4636 486793 ~ 487661 (+)
G2287973 NA other downstream 791217 1273374 ~ 1274170 (+)
triqk triqk other downstream 1726965 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1839717 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1898290 2380447 ~ 2381395 (+)

Expression


Co-expression Network