rims2b (LOC106570772)


Basic Information

Item Value
gene id rims2b
gene name LOC106570772
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 738621 ~ 899937 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971021.1
aatgtgtttcagtgGCTGTGTGATTGTGTATGTTTTTAATGTGTTTCAGTGGCTGTGTGATTGTGTATGttttcaatgtgtttcagtgGCTGTGTGATTGTGTATATTTTCTGTATGTGACTTTTTACGATAATTTATGTCTCTCTGTTTTCACATAAtttctctactgtctctgttctcaCCTGCCTCTGCtgtccctccccgtctctctctccctctctctctcggttatGACTTAATTCCACAGGAGATATGGATGGCCAATGGTGGGACCATGCATCTTGGCATAGCGAGGCCTTGTCTATGCACCCGATGACATGGCAACCGTCCAAAGATGGTGAGCGCCTGATTGGGCGGATTATACTAAACAAGAGGATGAAGGATGGAACGGTGCCCCGAGACACAGGAGCTCTGCTGGGACTCAAGGTGGTTGGAGGAAAGATGATGGATTCTGGTCGACTTTGTGCTTTCATCACTAAAGTGAAGAGAGGAAGTCTAGCAGATACTGTTGGTCACCTTCGACCAGgagATCAGGTTCTTGAATGGAATGGGAGGGTCCTACAAGGAGCAACATTCAAGGAAGTTTATAATGTCATTCTAGAATCGAAGCCAGACCCCCAAGTGGAGCTGGTTGTGTCCCGTCCCATACGAGATTCTTCCAGTATCTCAGAGAGCACACATGGACAACTTGAATCAAGTTCGAGTTTATTTGAATCCCAGAAGATGGGTCGAGCAATATCCGTCACGTCCCCCATGAGTCCTGGGATGCTCCGCTACTCCCCACAGTGCCTGTCTGGACACGTCTCAgtCAAACTGTGGTACGACAAGGTGGGTCACCAGCTCATAGTCACCATCCTGGGAGCTAAAGAATTTCCTTCTAGGGAAGACGGCCGGCCCAGGAACCCCTATGTTAAAATATACCTCCTCCCCGACAGAAGTGACAAAAGCAAAAGGAGAACGAAAACGGTGAAGAAGTCCCTGGAGCCTAAATGGAACCAGACGTTCATGTACATGCCTGTCCACTGGAGGGAGTTTAGAGAGCGCatgctggagatcactctgtggGACCAGGCCagggtcagagaggaggagagtgaattCATGGGAGGGATCCTCATAAACCTGGAGACAGCCTTGATGGATGACACAGCCCACTGGTACAAGTTACAAACCCACGATGTATCCTTCTTGGCAATGCCCAACCCCTCACCCTACACGCAGAGGAAACTGCTGTCGGGAGAGAGCCCCACTAGAAGGTTACAGATGTCCCAGAGAATTATTGACAGTGAGTTCTCTGATTTTGACTGCGAGGACGGGATCGGTGTCATAGCAGaCTACAGACACAACGGCAGGGACTTCCAGAGCTCCACGCTGTCTGTTCCAGAACAGGTCATGTCCTCCAACTACACCTCCCACTCTGACATGGCCAGGACCTGGTCAAGGTCGCCAAGTCTTCCCCCTCCACAGAGTCGGAGTTTGGACCACGGCATGCGAGGGGGACCGCTTTCTTTTAGCTCAGGTCGGATGGACCGGCATCGCTTGTCTGAAGACTGCTACTCACCAGACAGGATGAACACTTACTTGGTCCAAACAAGCACAACCGGTTCCCCAGTGTCTCATCAAAGAGGACGGCAGCTACCCAACGTCCCATCCAAGGGCTCACTGGATCGAAGAGGACCAATGGCGTATCAAACACCTCACCCCATCCACTACCgagtcccctcccctctccaacacCAGCCATCAATTCCTGTCCAGCAACATCCTCCACAACCTCTCATACGCCAACTATCTGCCCCTGTACAGTACCAAAACCAGCCCCCTGTATATTACCAAGGCCCACCCTGTGCTCAGTATCAAGCTCCCCCCCCTGTCCAGTCCCCAGCCCCTTCCCCAGCCCCTGTTgtaacctctcctccagccccTGCCCCAACACCTGCCCCAGTTgtaacctctcctccagcccctgccccagcagtaccttctcctccagccCCTGCCCCAACACCTGCCTCAGTTgtaacctctcctccagccccTGCCCCAATTGTAACCTCTACTTCAGCCCCTGCCCCAGTTgtaacctctcctccagctccttcCCCAGAGCCAGCccctgccccagccccagcccctgcCCCTGTTGTCACCTCTTCTCCAGCCCCAGAGCCAACCCCAGCCACAACTCCAGCCTCAAACCCTGTGCCGCCACCACAGACTCCTGAGCCAGGTGTGTCTCACTCATTtaatctgttgtctgtagctatGCTGTACCTCACAGAACCTCCCTACAACTATTCTTAACTTAACTGATAAAAATGTCTGTTTCCTCGATGTGTTCTGATGTATTATTTAGACTGTCTGTTGTCCTGTCTCATCCTCCTCGGTAATGTGACTGTCTGTGTTGTCCTGTCTCATCCTCCTCGGTAATGTGACTGTCTGTGTTGTCTTCTATCATCCTCCTCGGTAATGTGACCGTCTGTGTTgtcttctctcatcctcctcgGTAATGTGACTATCTGTGTTgtcttctctcatcctcctcgGTAATGTGACTGTCTGTGTTGTCTTCTATCATCCTCCTCGGTAATGTGACGGTGTCTTTCCCACAACCTGGAAGACACTGAGAGAAGCCAGTCTACAGTCAGTAATGGGAGGAACACACCTGGGGGTACGAG

Function

NR:

description
PREDICTED: regulating synaptic membrane exocytosis protein 2-like

GO: NA

KEGG:

id description
K15297 RIMS2, RIM2; regulating synaptic membrane exocytosis protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971021.1 True 2678 mRNA 0.52 14 738621 899937

Neighbor

gene id symbol gene type direction distance location
rnmt rnmt coding upstream 122194 596762 ~ 616427 (+)
seh1l seh1l coding upstream 151462 565124 ~ 587159 (+)
psmg2 psmg2 coding upstream 256464 476232 ~ 482157 (+)
spire1a LOC106589129 coding upstream 389093 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 499053 233676 ~ 240640 (+)
LOC110487806 LOC106570773 coding downstream 36385 936322 ~ 962116 (+)
ncaldb LOC105006551 coding downstream 380996 1280933 ~ 1361298 (+)
LOC110511936 spire1 coding downstream 700413 1600350 ~ 1639573 (+)
fam91a1 LOC106589122 coding downstream 811618 1711555 ~ 1825118 (+)
lratd2a LOC106589121 coding downstream 949523 1849460 ~ 1851250 (+)
G2287548 NA non-coding upstream 15929 720705 ~ 722692 (+)
G2287547 NA non-coding upstream 24945 709505 ~ 713676 (+)
G2287545 NA non-coding upstream 30736 706453 ~ 707885 (+)
G2287543 NA non-coding upstream 40119 698236 ~ 698502 (+)
G2287542 NA non-coding upstream 41746 696612 ~ 696875 (+)
G2287845 NA non-coding downstream 71145 971082 ~ 971496 (+)
G2287905 NA non-coding downstream 113138 1013075 ~ 1013400 (+)
G2287930 NA non-coding downstream 142166 1042103 ~ 1042605 (+)
G2287932 NA non-coding downstream 144369 1044306 ~ 1057024 (+)
G2287935 NA non-coding downstream 164154 1064091 ~ 1084625 (+)
G2287470 NA other upstream 250960 486793 ~ 487661 (+)
G2287973 NA other downstream 373437 1273374 ~ 1274170 (+)
triqk triqk other downstream 1309185 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1421937 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1480510 2380447 ~ 2381395 (+)
G2289325 NA other downstream 2160505 3060442 ~ 3060779 (+)

Expression


Co-expression Network