LOC118946536


Basic Information

Item Value
gene id LOC118946536
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 1892590 ~ 1893952 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971822.1
ATGGCTGAACGTGAGACTGAGGTTGGAGAGGATAATTACTCGGCTCTCAAGGACAAAGACGGAGTGAATGAAACATTGGAATTGGTACCTGAATCAACATACACCCAGGAGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGCGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGCGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGCGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGAGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGCGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGCGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGCGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGCGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGAGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGAGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGCGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGCGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGCGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGAGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGCGGCCCAGTGTACCAATCCAGAATCAACATACACCCAGGCGGCCCAGTGTACAAAGCTCCCCATCAGTCAGGAGTAA

Function

NR:

description
uncharacterized protein LOC110513291

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971822.1 True 771 mRNA 0.52 2 1892590 1893952

Neighbor

gene id symbol gene type direction distance location
lratd2a LOC106589121 coding upstream 41340 1849460 ~ 1851250 (+)
fam91a1 LOC106589122 coding upstream 67472 1711555 ~ 1825118 (+)
LOC110511936 spire1 coding upstream 253017 1600350 ~ 1639573 (+)
ncaldb LOC105006551 coding upstream 531292 1280933 ~ 1361298 (+)
LOC110487806 LOC106570773 coding upstream 930474 936322 ~ 962116 (+)
triqk triqk coding downstream 315067 2209019 ~ 2255119 (+)
cbfa2t2 runx1t1 coding downstream 631107 2525059 ~ 2686032 (+)
pip4p2 LOC106570754 coding downstream 872733 2766685 ~ 2800192 (+)
LOC110487823 LOC106570755 coding downstream 922524 2816476 ~ 2845566 (+)
LOC110487826 znf519 coding downstream 989976 2883928 ~ 2886784 (+)
G2288340 NA non-coding upstream 14216 1857328 ~ 1878374 (+)
G2288344 NA non-coding upstream 25498 1863292 ~ 1867092 (+)
G2288334 NA non-coding upstream 44076 1843342 ~ 1848514 (+)
G2288336 NA non-coding upstream 44333 1846812 ~ 1848257 (+)
G2288335 NA non-coding upstream 47524 1843719 ~ 1845066 (+)
G2288446 NA non-coding downstream 4128 1898080 ~ 1898672 (+)
G2288452 NA non-coding downstream 11819 1905771 ~ 1906229 (+)
G2288489 NA non-coding downstream 51399 1945351 ~ 1954328 (+)
G2288551 NA non-coding downstream 196560 2090512 ~ 2090874 (+)
G2288558 NA non-coding downstream 204858 2098810 ~ 2099142 (+)
G2287973 NA other upstream 618420 1273374 ~ 1274170 (+)
G2287470 NA other upstream 1404929 486793 ~ 487661 (+)
rpl30 LOC106589133 other upstream 1651950 233676 ~ 240640 (+)
G2288669 NA other downstream 427922 2321874 ~ 2324182 (+)
G2288814 NA other downstream 486495 2380447 ~ 2381395 (+)
G2289325 NA other downstream 1166490 3060442 ~ 3060779 (+)
G2290395 NA other downstream 2554937 4448889 ~ 4449571 (+)

Expression


Co-expression Network